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IVF0001146 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001146
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:9462593..9462862
RNA-Seq ExpressionIVF0001146
SyntenyIVF0001146
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]7.73e-3775Show/hide
Query:  KTKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV
        KTK SIEEPP+L+LKSL NHLKY YL ENDTLPV IS+HL+VA+E+ +L MLK HKK I WTLVDIQGIS SYCMHK+RLEEG E T+
Subjt:  KTKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV

KAA0059789.1 uncharacterized protein E6C27_scaffold108G00540 [Cucumis melo var. makuwa]1.82e-2961.36Show/hide
Query:  KTKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV
        KTK SIEEPP+L+LK L NHLKYAYL ENDTLPV I ++L+  +E+ +L +LK  KK   WTL DIQGIS SY +HKI+L+EG   T+
Subjt:  KTKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV

TYJ96913.1 uncharacterized protein E5676_scaffold220G00140 [Cucumis melo var. makuwa]1.25e-3376.62Show/hide
Query:  LKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV
        +KLK LLNHLKYAYL ENDTLPV+IS+HL+VAEE+ +L MLK HKKAI WTLV IQGISPSYCMHKIRLE+  E T+
Subjt:  LKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV

WP_217833196.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]7.94e-3367.05Show/hide
Query:  KTKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV
        KTK S+EEPP L+LK+L  HLKYAYL E  TLPVIIS+ L    E+ +L++LK+H KAIGWTL DI+GISPSYCMHKIRLEEG + +V
Subjt:  KTKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV

WP_217833341.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.36e-2963.95Show/hide
Query:  KSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV
        K S+EE P L+LK+L  HLKYAYL E  TLP IISS L    E+ +L +LK+H KAIGWTL DI+GISPSYCMHKI+LEEG +  V
Subjt:  KSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV

TrEMBL top hitse value%identityAlignment
A0A1U7XHZ7 uncharacterized protein LOC1042346595.0e-2359.3Show/hide
Query:  KSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV
        K SIEE PKL+LK L  HL+YAYL ++DTLPVI+SS L++ +EE +L++L+ HK+A+GWT+ DI+GISP++CMHKI +E+GH+ +V
Subjt:  KSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV

A0A2Z6NIG2 Retrotrans_gag domain-containing protein2.5e-2267.07Show/hide
Query:  TKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEG
        TK SIE+PP L+LK L  +LKYAYL EN+ LPVIISS+L+  +EE +L++LK HKKAIGWTL DI GISP+ CMH+I LEEG
Subjt:  TKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEG

A0A5A7UF79 Uncharacterized protein4.6e-2975Show/hide
Query:  KTKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV
        KTK SIEEPP+L+LKSL NHLKY YL ENDTLPV IS+HL+VA+E+ +L MLK HKK I WTLVDIQGIS SYCMHK+RLEEG E T+
Subjt:  KTKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV

A0A5D3BC69 Uncharacterized protein1.1e-2576.62Show/hide
Query:  LKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV
        +KLK LLNHLKYAYL ENDTLPV+IS+HL+VAEE+ +L MLK HKKAI WTLV IQGISPSYCMHKIRLE+  E T+
Subjt:  LKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV

A0A5D3BDT2 RT_RNaseH domain-containing protein2.5e-2268.29Show/hide
Query:  TKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEG
        TK S+ EP +L+LK L NHLKY YL ENDTLP IIS HLN  EEE +L  LK HKK IGWTL DI+G SPS  MHKI+LEEG
Subjt:  TKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACAAAGTCATCCATTGAAGAACCACCTAAACTAAAGCTCAAGTCGTTACTAAACCACTTGAAATATGCATATTTGTGGGAGAATGACACATTGCCCGTCATCAT
CTCCTCCCACTTGAATGTTGCTGAAGAAGAGGTGGTATTAAAAATGCTAAAACACCACAAGAAGGCAATAGGATGGACCCTGGTAGACATTCAAGGCATAAGTCCATCCT
ATTGCATGCACAAAATCAGGCTAGAAGAGGGCCACGAGGACACCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACAAAGTCATCCATTGAAGAACCACCTAAACTAAAGCTCAAGTCGTTACTAAACCACTTGAAATATGCATATTTGTGGGAGAATGACACATTGCCCGTCATCAT
CTCCTCCCACTTGAATGTTGCTGAAGAAGAGGTGGTATTAAAAATGCTAAAACACCACAAGAAGGCAATAGGATGGACCCTGGTAGACATTCAAGGCATAAGTCCATCCT
ATTGCATGCACAAAATCAGGCTAGAAGAGGGCCACGAGGACACCGTTTAA
Protein sequenceShow/hide protein sequence
MKTKSSIEEPPKLKLKSLLNHLKYAYLWENDTLPVIISSHLNVAEEEVVLKMLKHHKKAIGWTLVDIQGISPSYCMHKIRLEEGHEDTV