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IVF0001147 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001147
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionKeratin, type I cytoskeletal 9-like
Genome locationchr11:23588829..23589104
RNA-Seq ExpressionIVF0001147
SyntenyIVF0001147
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033516.1 keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]8.40e-62100Show/hide
Query:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS
        MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS
Subjt:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS

KAA0039661.1 keratin, type I cytoskeletal 10-like [Cucumis melo var. makuwa]4.15e-3469.05Show/hide
Query:  SSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAM
        S G+D  +WQG+RRGR HGRG+EHQNS+GG  NT  GTRDKSHIKCFTC+K+GHY  + HGK  DDEAHLTCTV+EE +LMM +
Subjt:  SSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAM

XP_031741744.1 uncharacterized protein LOC116403940 [Cucumis sativus]3.61e-3472.53Show/hide
Query:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS
        MNK  G SG DRG+W+GR      GRG E QNS GG  NT NGTRDKSHIKCFTC+K+GHYA E  GKGRDDEAHLTC V+EEPSLMMAMS
Subjt:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS

XP_038888718.1 uncharacterized protein LOC120078515 [Benincasa hispida]3.09e-3471.43Show/hide
Query:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS
        +NK  GS G D G+WQGR RGRGHG   E QNS GG  NT NGTRDKSHIKCFTC+K+GHYA E  GKGRDDEAHLTC  DEEP L MA+S
Subjt:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS

XP_038889342.1 uncharacterized protein LOC120079255 [Benincasa hispida]5.80e-3974.44Show/hide
Query:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAM
        +NK CGS G+DR +WQGR R  G GRG E QNS GG  NTENGTRDKSHIKCFTC+K GHYA E  GKGRDDEAHLTC VDEEP+LMMA+
Subjt:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAM

TrEMBL top hitse value%identityAlignment
A0A5A7SIJ0 Keratin, type I cytoskeletal 9-like4.4e-1959.09Show/hide
Query:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMM
        M KRCGSS  D  +W G     G  RG + QN  GG  NT+NGTRDKSHIKCFTC+K+ HY  E H KGRDD AHLT   D+EP+LM+
Subjt:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMM

A0A5A7TDE3 Keratin, type I cytoskeletal 10-like8.4e-2669.05Show/hide
Query:  SSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAM
        S G+D  +WQG+RRGR HGRG+EHQNS+GG  NT  GTRDKSHIKCFTC+K+GHY  + HGK  DDEAHLTCTV+EE +LMM +
Subjt:  SSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAM

A0A5D3B747 Keratin, type I cytoskeletal 9-like1.5e-46100Show/hide
Query:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS
        MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS
Subjt:  MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS

Q10F84 Gag-pol polyprotein3.9e-0747.25Show/hide
Query:  NKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFE-SHGKGRDDEAHLTCTVDEEPSLMMAMS
        NK  G   N RG+  GR RGRG GRG     S GG     +G RDKSHIKCF C + GHY+ +  H K +  EAHL  T D  P+L++A++
Subjt:  NKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFE-SHGKGRDDEAHLTCTVDEEPSLMMAMS

Q84SW8 Retrotransposon protein, putative, unclassified3.9e-0747.25Show/hide
Query:  NKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFE-SHGKGRDDEAHLTCTVDEEPSLMMAMS
        NK  G   N RG+  GR RGRG GRG     S GG     +G RDKSHIKCF C + GHY+ +  H K +  EAHL  T D  P+L++A++
Subjt:  NKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFE-SHGKGRDDEAHLTCTVDEEPSLMMAMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAAAGGTGCGGATCCAGTGGTAACGATCGAGGAAAATGGCAAGGACGAAGACGAGGTCGTGGTCATGGTCGTGGCATGGAGCATCAAAATAGTGTAGGAGGTCC
TTGCAACACCGAAAATGGCACTCGTGACAAAAGTCACATAAAGTGCTTCACTTGCAGCAAGATAGGACACTATGCATTCGAGAGCCATGGAAAAGGTCGTGACGACGAAG
CTCATCTAACTTGCACCGTCGACGAAGAACCATCTTTAATGATGGCCATGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAAAAGGTGCGGATCCAGTGGTAACGATCGAGGAAAATGGCAAGGACGAAGACGAGGTCGTGGTCATGGTCGTGGCATGGAGCATCAAAATAGTGTAGGAGGTCC
TTGCAACACCGAAAATGGCACTCGTGACAAAAGTCACATAAAGTGCTTCACTTGCAGCAAGATAGGACACTATGCATTCGAGAGCCATGGAAAAGGTCGTGACGACGAAG
CTCATCTAACTTGCACCGTCGACGAAGAACCATCTTTAATGATGGCCATGTCTTAG
Protein sequenceShow/hide protein sequence
MNKRCGSSGNDRGKWQGRRRGRGHGRGMEHQNSVGGPCNTENGTRDKSHIKCFTCSKIGHYAFESHGKGRDDEAHLTCTVDEEPSLMMAMS