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IVF0001179 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001179
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr05:13554963..13555295
RNA-Seq ExpressionIVF0001179
SyntenyIVF0001179
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041154.1 hypothetical protein E6C27_scaffold128G00750 [Cucumis melo var. makuwa]1.51e-0641.57Show/hide
Query:  EQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQ--QENLGAPDPCNKN
        +Q+         L  TVSNL S++                +F A MEYT+AVFV+R+PQPVI+ EL AP  PIQ     LG PDP  +N
Subjt:  EQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQ--QENLGAPDPCNKN

KAA0054434.1 hypothetical protein E6C27_scaffold24G001880 [Cucumis melo var. makuwa]3.95e-1168Show/hide
Query:  IGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDP
        +GE RD +F+ASMEYTHA+FVQRVPQPVI  ELE P PPI Q   G P P
Subjt:  IGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDP

KAA0064129.1 uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa]1.87e-2955.45Show/hide
Query:  MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQEN
        MTT++EKVQ EN+KLKQ++++QQ+Q+ K   N+DQLS TVSNLT ++I   ++ W++G  RD QF+AS+EYTHAVF QR+P P I  E+E+  P IQ  N
Subjt:  MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQEN

Query:  LGAPDPCNKN
        LG PDP   N
Subjt:  LGAPDPCNKN

TYK14602.1 hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa]2.78e-1155.88Show/hide
Query:  TVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDP
        TV+ L +L     ++  ++GE RD +F+ASMEYTHA+FVQRVPQPVI  ELE P PPI Q   G P P
Subjt:  TVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDP

TYK28611.1 hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa]5.22e-3055.45Show/hide
Query:  MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQEN
        MTT++EKVQ EN+KLKQ++++QQ+Q+ K   N+DQLS TVSNLT ++I   ++ W++G  RD QF+AS+EYTHAVF QR+P P I  E+E+  P IQ  N
Subjt:  MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQEN

Query:  LGAPDPCNKN
        LG PDP   N
Subjt:  LGAPDPCNKN

TrEMBL top hitse value%identityAlignment
A0A5A7UH00 Uncharacterized protein4.3e-0868Show/hide
Query:  IGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDP
        +GE RD +F+ASMEYTHA+FVQRVPQPVI  ELE P PPI Q   G P P
Subjt:  IGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDP

A0A5A7VF20 Uncharacterized protein4.2e-2455.45Show/hide
Query:  MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQEN
        MTT++EKVQ EN+KLKQ++++QQ+Q+ K   N+DQLS TVSNLT ++I   ++ W++G  RD QF+AS+EYTHAVF QR+P P I  E+E+  P IQ  N
Subjt:  MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQEN

Query:  LGAPDPCNKN
        LG PDP   N
Subjt:  LGAPDPCNKN

A0A5D3CKB6 Retrovirus-related Pol polyprotein from transposon 17.69.8e-0556.6Show/hide
Query:  IGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAP--DPC
        I +  D QF   MEYTHA+FVQ V QPVI+ EL AP+PPIQ  N      DPC
Subjt:  IGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAP--DPC

A0A5D3CT45 Uncharacterized protein1.9e-0855.88Show/hide
Query:  TVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDP
        TV+ L +L     ++  ++GE RD +F+ASMEYTHA+FVQRVPQPVI  ELE P PPI Q   G P P
Subjt:  TVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDP

A0A5D3DYE2 Uncharacterized protein4.2e-2455.45Show/hide
Query:  MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQEN
        MTT++EKVQ EN+KLKQ++++QQ+Q+ K   N+DQLS TVSNLT ++I   ++ W++G  RD QF+AS+EYTHAVF QR+P P I  E+E+  P IQ  N
Subjt:  MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQEN

Query:  LGAPDPCNKN
        LG PDP   N
Subjt:  LGAPDPCNKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTATGCTAGAGAAAGTTCAAGCTGAGAATGCCAAACTTAAGCAGATAGTATCTCAACAGCAAGAACAGCTGGGAAAGTTCACGAAAAATAAAGATCAATTGTC
CTTCACGGTCTCTAACCTTACCTCTCTACTTATCACGCAGTCTGATTTGATGTGGCAGATAGGCGAGGGACGTGATAGTCAGTTTAGAGCTTCCATGGAGTATACTCATG
CAGTGTTTGTCCAACGTGTGCCTCAACCTGTCATTCTGCTTGAACTAGAAGCACCTTCCCCACCTATTCAACAAGAAAATCTTGGCGCCCCTGACCCCTGCAATAAGAAC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTATGCTAGAGAAAGTTCAAGCTGAGAATGCCAAACTTAAGCAGATAGTATCTCAACAGCAAGAACAGCTGGGAAAGTTCACGAAAAATAAAGATCAATTGTC
CTTCACGGTCTCTAACCTTACCTCTCTACTTATCACGCAGTCTGATTTGATGTGGCAGATAGGCGAGGGACGTGATAGTCAGTTTAGAGCTTCCATGGAGTATACTCATG
CAGTGTTTGTCCAACGTGTGCCTCAACCTGTCATTCTGCTTGAACTAGAAGCACCTTCCCCACCTATTCAACAAGAAAATCTTGGCGCCCCTGACCCCTGCAATAAGAAC
TAA
Protein sequenceShow/hide protein sequence
MTTMLEKVQAENAKLKQIVSQQQEQLGKFTKNKDQLSFTVSNLTSLLITQSDLMWQIGEGRDSQFRASMEYTHAVFVQRVPQPVILLELEAPSPPIQQENLGAPDPCNKN