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IVF0001211 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001211
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr04:12101902..12102132
RNA-Seq ExpressionIVF0001211
SyntenyIVF0001211
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051967.1 pol protein [Cucumis melo var. makuwa]1.35e-1073.47Show/hide
Query:  VSHAA-DLPAVSVPTASHAPCRPVQPKRNRRQSPPPCEFSSVIVPPKTS
        +SH+A DLP VSV TASHAPCRPVQ +RN RQS  PCEFSSV+ P KTS
Subjt:  VSHAA-DLPAVSVPTASHAPCRPVQPKRNRRQSPPPCEFSSVIVPPKTS
TrEMBL top hitse value%identityAlignment
A0A5A7UC10 Reverse transcriptase3.8e-0873.47Show/hide
Query:  VSHAA-DLPAVSVPTASHAPCRPVQPKRNRRQSPPPCEFSSVIVPPKTS
        +SH+A DLP VSV TASHAPCRPVQ +RN RQS  PCEFSSV+ P KTS
Subjt:  VSHAA-DLPAVSVPTASHAPCRPVQPKRNRRQSPPPCEFSSVIVPPKTS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGCGTTCAACCGTCGTGGCTGCCCCATTTCCGATCTCCTTCCTGTCTCACACGCCGCAGATCTGCCGGCCGTCTCTGTCCCTACCGCAAGCCACGCTCCATGTCG
ACCGGTGCAGCCCAAAAGAAATCGCAGACAGTCGCCACCGCCGTGTGAGTTTTCGTCTGTCATTGTGCCACCCAAGACCAGCTCATCGTGTGTGCGCTGGGTGCTTCGAG
CCGAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGCGTTCAACCGTCGTGGCTGCCCCATTTCCGATCTCCTTCCTGTCTCACACGCCGCAGATCTGCCGGCCGTCTCTGTCCCTACCGCAAGCCACGCTCCATGTCG
ACCGGTGCAGCCCAAAAGAAATCGCAGACAGTCGCCACCGCCGTGTGAGTTTTCGTCTGTCATTGTGCCACCCAAGACCAGCTCATCGTGTGTGCGCTGGGTGCTTCGAG
CCGAAGGCTGA
Protein sequenceShow/hide protein sequence
MPAFNRRGCPISDLLPVSHAADLPAVSVPTASHAPCRPVQPKRNRRQSPPPCEFSSVIVPPKTSSSCVRWVLRAEG