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IVF0001245 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001245
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein CHROMATIN REMODELING 5 isoform X1
Genome locationchr02:11394825..11395132
RNA-Seq ExpressionIVF0001245
SyntenyIVF0001245
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032607.1 protein CHROMATIN REMODELING 5 isoform X1 [Cucumis melo var. makuwa]5.73e-3570.41Show/hide
Query:  MSIVERFRLQYPGTGGSSSKSVFSGMVRGC-----------VRTWGVDVWRRDDMSSIGVPFVV----------LLIRNSAIRWIVRRWNDGSMTTAT
        MS+VERFRLQYP TGGS SKSVFSGMV+G            VRTWGVDV RRDDMSS+GVPFVV          LLI NSAIRWIVRRWNDGSMTTAT
Subjt:  MSIVERFRLQYPGTGGSSSKSVFSGMVRGC-----------VRTWGVDVWRRDDMSSIGVPFVV----------LLIRNSAIRWIVRRWNDGSMTTAT
KAA0032824.1 ras-related protein RABH1b-like isoform X1 [Cucumis melo var. makuwa]2.84e-0883.33Show/hide
Query:  GCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
        GCVRTWGVDV RRDDMSS+GVPFVV L R+
Subjt:  GCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
KAA0039079.1 putative magnesium transporter NIPA2 isoform X2 [Cucumis melo var. makuwa]3.66e-0880Show/hide
Query:  GCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
        GCVRTWG+DV RRDDMSS+GVPFVV L R+
Subjt:  GCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
KAA0053634.1 putative magnesium transporter NIPA2 isoform X2 [Cucumis melo var. makuwa]2.27e-0864.44Show/hide
Query:  TGGSSSKSVFSGMVRGCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
        TG   ++ V  G+  GCVRTWGVDV RRDDMSS+GVPFVV L R+
Subjt:  TGGSSSKSVFSGMVRGCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
TrEMBL top hitse value%identityAlignment
A0A5A7SNP7 Ras-related protein RABH1b-like isoform X14.2e-0583.33Show/hide
Query:  GCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
        GCVRTWGVDV RRDDMSS+GVPFVV L R+
Subjt:  GCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
A0A5A7STC6 Protein CHROMATIN REMODELING 5 isoform X11.5e-2670.41Show/hide
Query:  MSIVERFRLQYPGTGGSSSKSVFSGMVRGC-----------VRTWGVDVWRRDDMSSIGVPFVV----------LLIRNSAIRWIVRRWNDGSMTTAT
        MS+VERFRLQYP TGGS SKSVFSGMV+G            VRTWGVDV RRDDMSS+GVPFVV          LLI NSAIRWIVRRWNDGSMTTAT
Subjt:  MSIVERFRLQYPGTGGSSSKSVFSGMVRGC-----------VRTWGVDVWRRDDMSSIGVPFVV----------LLIRNSAIRWIVRRWNDGSMTTAT
A0A5A7UEI9 Putative magnesium transporter NIPA2 isoform X21.5e-0564.44Show/hide
Query:  TGGSSSKSVFSGMVRGCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
        TG   ++ V  G+  GCVRTWGVDV RRDDMSS+GVPFVV L R+
Subjt:  TGGSSSKSVFSGMVRGCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
A0A5D3D549 Putative magnesium transporter NIPA2 isoform X29.5e-0580Show/hide
Query:  GCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
        GCVRTWG+DV RRDDMSS+GVPFVV L R+
Subjt:  GCVRTWGVDVWRRDDMSSIGVPFVVLLIRN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATTGTTGAGCGATTTCGGTTGCAATATCCCGGCACCGGAGGCTCATCCAGTAAGTCAGTTTTTAGCGGAATGGTTCGAGGCTGTGTTCGCACGTGGGGTGTGGA
CGTCTGGAGACGAGACGACATGAGTTCCATCGGTGTTCCGTTTGTGGTGCTCTTGATTAGAAACTCTGCCATAAGATGGATTGTGCGTCGGTGGAACGATGGCTCGATGA
CAACGGCGACGGTGGGGACGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTATTGTTGAGCGATTTCGGTTGCAATATCCCGGCACCGGAGGCTCATCCAGTAAGTCAGTTTTTAGCGGAATGGTTCGAGGCTGTGTTCGCACGTGGGGTGTGGA
CGTCTGGAGACGAGACGACATGAGTTCCATCGGTGTTCCGTTTGTGGTGCTCTTGATTAGAAACTCTGCCATAAGATGGATTGTGCGTCGGTGGAACGATGGCTCGATGA
CAACGGCGACGGTGGGGACGATGTAG
Protein sequenceShow/hide protein sequence
MSIVERFRLQYPGTGGSSSKSVFSGMVRGCVRTWGVDVWRRDDMSSIGVPFVVLLIRNSAIRWIVRRWNDGSMTTATVGTM