; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001249 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001249
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationchr07:20663760..20665261
RNA-Seq ExpressionIVF0001249
SyntenyIVF0001249
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]1.36e-12466.55Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
        MAGF+PL     GGR PNYH PT TT       TT+GLFWY+NYE LE W        QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV

Query:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
         SCQDCGNQAKKDC HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R LRSDG N KRP+D      SSGL+M NFP+EV++ AVFRCVRMTTLDET+DQ
Subjt:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQ-----PPPPPSSSS--------------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        +AYQTAVNIGGH FKGILYDHGPEQ     PPPPP+S+S                    +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQ-----PPPPPSSSS--------------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS

XP_004146546.1 protein SHI RELATED SEQUENCE 1 [Cucumis sativus]2.39e-18695.85Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEE+ QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGGPV
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV

Query:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
        TSCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EVTTPAVFRCVRMT+LDETDDQ
Subjt:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        YAYQTAVNIGG IFKGILYDHGPEQPPPPPSSSSAA LLD TPPYPTPLSTYITAGTQFFLPPSS
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

XP_008465489.1 PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo]1.15e-198100Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV

Query:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
        TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
Subjt:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

XP_038881624.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]3.28e-13774.91Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGS
        MAGFFPLDGGGS GR PNY FPT TT     GGEIIHPT +GLFWYKNYERLETWE       +QQ  QEQGGEGFVYSGDESPARSSLVMVRSGRGG  
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGS

Query:  GGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLD
         GG V SCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRR+R LR DG N KRPKD      SSGL+M  FP EV++ AVFRCVRMTTLD
Subjt:  GGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLD

Query:  ETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS---------SSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        ET +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S         ++ +A LLD  PPYPTPL+TYI AGTQFFLPP+S
Subjt:  ETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS---------SSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

XP_038881630.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]2.95e-13774.91Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGS
        MAGFFPLDGGGS GR PNY FPT TT     GGEIIHPT +GLFWYKNYERLETWE       +QQ  QEQGGEGFVYSGDESPARSSLVMVRSGRGG  
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGS

Query:  GGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLD
         GG V SCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRR+R LR DG N KRPKD      SSGL+M  FP EV++ AVFRCVRMTTLD
Subjt:  GGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLD

Query:  ETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS---------SSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        ET +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S         ++ +A LLD  PPYPTPL+TYI AGTQFFLPP+S
Subjt:  ETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS---------SSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein1.7e-14395.85Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEE+ QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGGPV
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV

Query:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
        TSCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EVTTPAVFRCVRMT+LDETDDQ
Subjt:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        YAYQTAVNIGG IFKGILYDHGPEQPPPPPSSSS AALLD TPPYPTPLSTYITAGTQFFLPPSS
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

A0A1S3CNX3 protein SHI RELATED SEQUENCE 1-like8.9e-153100Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV

Query:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
        TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
Subjt:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

A0A5A7TNR6 Protein SHI RELATED SEQUENCE 1-like8.9e-153100Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV

Query:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
        TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
Subjt:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

A0A6J1FUH1 protein SHORT INTERNODES-like3.4e-9666.78Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
        MAGFFPL     GGR PNYH PT TT       TT+GLFWY+NYE L  W        QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV

Query:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
         SCQDCGNQAKKDC HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R LRSDG N KRP+D      SSGL+M NFP+EV++ AVFRCVRMTTLDET+DQ
Subjt:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQ----PPPPPSSSS--------------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        +AYQTAVNIGGH FKGILYDHGPEQ    PPPPP+S+S                    +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQ----PPPPPSSSS--------------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like1.7e-9566.67Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV
        MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W        QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPV

Query:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ
         SCQDCGNQAKKDC HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R LRSD  N KRP+D      SSGL+M NFPMEV++ AVFRCVRMTTLDET+DQ
Subjt:  TSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPE---QPPPPPSSSS--------------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS
        +AYQTAVNIGGH FKGILYDHGPE   QPPPPP+S+S                    +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Subjt:  YAYQTAVNIGGHIFKGILYDHGPE---QPPPPPSSSS--------------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 16.1e-4236.91Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPT-TEGLFWYKN--------------YERLETWEG-------EEEHQQQQQ------PAQE-------
        MA FF L     GG     H     +  + + PT +   F Y+N              Y+  E W+         + HQQQQQ      P Q+       
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPT-TEGLFWYKN--------------YERLETWEG-------EEEHQQQQQ------PAQE-------

Query:  ----QGGEGF-VYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGL------
                GF + +GD   +RS  VM+RSG GG        SCQDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTWVPA+KRR+R  +   L      
Subjt:  ----QGGEGF-VYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGL------

Query:  -----NSKRPKDTHYHPTSS------------GLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQP--------PPP
             N+ + K     P++S            GL++  FP +V T AVF+C++M+++++ +DQ AYQ AV+IGGH+FKGILYD G E             
Subjt:  -----NSKRPKDTHYHPTSS------------GLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQP--------PPP

Query:  PSSSSA----------AALLDSTPP------------------YPTPLSTYITAGTQFFLPPS
         S  SA          AA+  +T                    +P PLST++ AGTQFF PPS
Subjt:  PSSSSA----------AALLDSTPP------------------YPTPLSTYITAGTQFFLPPS

O65517 Protein SHI RELATED SEQUENCE 21.3e-3652.9Show/hide
Query:  SCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD
        SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +                + G  S  PK  H  PT             S+GL+
Subjt:  SCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD

Query:  M--ANFPMEVTTPAVFRCVRMTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE
        M  A+FP EV++ A+FRCV+M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Subjt:  M--ANFPMEVTTPAVFRCVRMTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE

Q9LQZ5 Protein SHI RELATED SEQUENCE 57.5e-4039.93Show/hide
Query:  YKNYERLETWE----GEEEHQQQQQPAQEQGGEGFVYSGDESPA---------RSSLVMVRSGRGGGSGGGPVT-----SCQDCGNQAKKDCAHMRCRTC
        Y N +  E W      ++EHQQQQQ  Q        YS    P+         RS  +          GG  VT     +CQDCGNQAKKDC HMRCRTC
Subjt:  YKNYERLETWE----GEEEHQQQQQPAQEQGGEGFVYSGDESPA---------RSSLVMVRSGRGGGSGGGPVT-----SCQDCGNQAKKDCAHMRCRTC

Query:  CKSRGFECETHVKSTWVPASKRRDRLLRSDGL-----------NSKRPK--------DTHYHPTSSGLDMAN-----------------FPMEVTTPAVF
        CKSRGF C+THVKSTWVPA+KRR+RL +   L           N+KR +        D   H    G  +AN                  P EV +PA+F
Subjt:  CKSRGFECETHVKSTWVPASKRRDRLLRSDGL-----------NSKRPK--------DTHYHPTSSGLDMAN-----------------FPMEVTTPAVF

Query:  RCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQ----------------------PPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLP
        RCVR++++  DE D  YAYQTAVNIGGHIFKGILYD GPE                             +++   +LD +  YP  L+++I AGT FF P
Subjt:  RCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQ----------------------PPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLP

Query:  PSS
        P S
Subjt:  PSS

Q9SD40 Protein SHI RELATED SEQUENCE 18.3e-4736.46Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------------YERLETWEG---------EEEHQQQQQPAQEQGGE
        MAGFF LDGGG GG     +     +      P +E   WY+N                         LE W+           ++HQQ+        G 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------------YERLETWEG---------EEEHQQQQQPAQEQGGE

Query:  G--------FVYSGDESPA----RSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDR----------
        G        F  SG+ S A     ++++M+RSG  GG  GG   SCQDCGNQAKKDC+HMRCRTCCKSRGFEC THV+STWVPA+KRR+R          
Subjt:  G--------FVYSGDESPA----RSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDR----------

Query:  --LLRSDGLNSKRPKDTHYH---------PTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP-------------
          L R + +  +  ++             P+ SGL++ NFP EV++ AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP             
Subjt:  --LLRSDGLNSKRPKDTHYH---------PTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP-------------

Query:  --------------------------EQPPP-----PPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
                                      P       SS++AA  +D    YPTP++T++ AGTQFF  P S
Subjt:  --------------------------EQPPP-----PPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

Q9XGX0 Protein SHORT INTERNODES1.6e-4239.4Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEEH----QQQQQPAQEQGGEGFVYSGDESPA
        MAGFF L  GG G    N+   T  P++ G      TE   W +N             Y+  LE W+         QQQQQ  Q              P+
Subjt:  MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEEH----QQQQQPAQEQGGEGFVYSGDESPA

Query:  RSSLVMVRSG-----RGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR-SDG-----LNSKRPKDTHYH----
          SL+    G     R G   GGP  SCQDCGNQ+KKDC+HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G     L    PK         
Subjt:  RSSLVMVRSG-----RGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR-SDG-----LNSKRPKDTHYH----

Query:  -----------PTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA-----
                     +SGL++ NFP EV++ AVFRCVR++++D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       PS+SS++     
Subjt:  -----------PTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA-----

Query:  --ALLDSTPP---------YPTPLSTYITAGTQFF
           ++ ST           YPTP++T++T GT FF
Subjt:  --ALLDSTPP---------YPTPLSTYITAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G75520.1 SHI-related sequence 55.3e-4139.93Show/hide
Query:  YKNYERLETWE----GEEEHQQQQQPAQEQGGEGFVYSGDESPA---------RSSLVMVRSGRGGGSGGGPVT-----SCQDCGNQAKKDCAHMRCRTC
        Y N +  E W      ++EHQQQQQ  Q        YS    P+         RS  +          GG  VT     +CQDCGNQAKKDC HMRCRTC
Subjt:  YKNYERLETWE----GEEEHQQQQQPAQEQGGEGFVYSGDESPA---------RSSLVMVRSGRGGGSGGGPVT-----SCQDCGNQAKKDCAHMRCRTC

Query:  CKSRGFECETHVKSTWVPASKRRDRLLRSDGL-----------NSKRPK--------DTHYHPTSSGLDMAN-----------------FPMEVTTPAVF
        CKSRGF C+THVKSTWVPA+KRR+RL +   L           N+KR +        D   H    G  +AN                  P EV +PA+F
Subjt:  CKSRGFECETHVKSTWVPASKRRDRLLRSDGL-----------NSKRPK--------DTHYHPTSSGLDMAN-----------------FPMEVTTPAVF

Query:  RCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQ----------------------PPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLP
        RCVR++++  DE D  YAYQTAVNIGGHIFKGILYD GPE                             +++   +LD +  YP  L+++I AGT FF P
Subjt:  RCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQ----------------------PPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLP

Query:  PSS
        P S
Subjt:  PSS

AT2G21400.1 SHI-related sequence31.2e-3554.17Show/hide
Query:  CQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYA
        C+DCGNQAKKDC +MRCRTCCKS+ F C+TH+KSTWVPA +R     +S  L++  PK    H T       +FP E+++ A FRCV+++++D+  +QYA
Subjt:  CQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYA

Query:  YQTAVNIGGHIFKGILYDHG
        YQT VNIGGH+F+GIL+D G
Subjt:  YQTAVNIGGHIFKGILYDHG

AT3G51060.1 Lateral root primordium (LRP) protein-related5.9e-4836.46Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------------YERLETWEG---------EEEHQQQQQPAQEQGGE
        MAGFF LDGGG GG     +     +      P +E   WY+N                         LE W+           ++HQQ+        G 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------------YERLETWEG---------EEEHQQQQQPAQEQGGE

Query:  G--------FVYSGDESPA----RSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDR----------
        G        F  SG+ S A     ++++M+RSG  GG  GG   SCQDCGNQAKKDC+HMRCRTCCKSRGFEC THV+STWVPA+KRR+R          
Subjt:  G--------FVYSGDESPA----RSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDR----------

Query:  --LLRSDGLNSKRPKDTHYH---------PTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP-------------
          L R + +  +  ++             P+ SGL++ NFP EV++ AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP             
Subjt:  --LLRSDGLNSKRPKDTHYH---------PTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP-------------

Query:  --------------------------EQPPP-----PPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS
                                      P       SS++AA  +D    YPTP++T++ AGTQFF  P S
Subjt:  --------------------------EQPPP-----PPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

AT4G36260.1 Lateral root primordium (LRP) protein-related9.4e-3852.9Show/hide
Query:  SCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD
        SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +                + G  S  PK  H  PT             S+GL+
Subjt:  SCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD

Query:  M--ANFPMEVTTPAVFRCVRMTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE
        M  A+FP EV++ A+FRCV+M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Subjt:  M--ANFPMEVTTPAVFRCVRMTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE

AT5G66350.1 Lateral root primordium (LRP) protein-related1.1e-4339.4Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEEH----QQQQQPAQEQGGEGFVYSGDESPA
        MAGFF L  GG G    N+   T  P++ G      TE   W +N             Y+  LE W+         QQQQQ  Q              P+
Subjt:  MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEEH----QQQQQPAQEQGGEGFVYSGDESPA

Query:  RSSLVMVRSG-----RGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR-SDG-----LNSKRPKDTHYH----
          SL+    G     R G   GGP  SCQDCGNQ+KKDC+HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G     L    PK         
Subjt:  RSSLVMVRSG-----RGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR-SDG-----LNSKRPKDTHYH----

Query:  -----------PTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA-----
                     +SGL++ NFP EV++ AVFRCVR++++D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       PS+SS++     
Subjt:  -----------PTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA-----

Query:  --ALLDSTPP---------YPTPLSTYITAGTQFF
           ++ ST           YPTP++T++T GT FF
Subjt:  --ALLDSTPP---------YPTPLSTYITAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGGGGAAGAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCGACAACCGAGGG
GTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAAGAACATCAACAGCAGCAGCAACCGGCGCAAGAACAAGGGGGAGAAGGGTTTGTTTACT
CCGGCGATGAATCGCCAGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGCAGCGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCC
AAAAAAGATTGTGCTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCCTCTAAACGCCGTGACCG
CCTCCTCCGTTCCGACGGCCTCAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGGTTGGACATGGCGAATTTTCCGATGGAAGTGACCACACCGG
CTGTCTTTCGGTGTGTACGAATGACAACCTTGGACGAAACCGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGAT
CACGGCCCTGAACAACCACCTCCCCCGCCCTCCTCCTCCTCCGCCGCCGCATTGCTCGATTCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTAC
GCAATTTTTTCTTCCTCCATCATCTTAG
mRNA sequenceShow/hide mRNA sequence
AGAAGAGAGAGAAAGAGAAAGAAAGAAAAAAAAAAAAAAAGGTAATCAATCATCTCTGCAAAACTGCAACAAAATCAGAGCATAGAGAAAGGGAAAGACCTCAGAGAAAG
ACAGAGAAGAAGAACAACCACAACAACAAAGAAGAAAGAAGTTAATTTATTTTGTTCTCTATTTAAGTTAGCACCGCCGTTTCCCATGGCGGCGTTGCAGACCACTTCAC
TTTTGCATATCAAATAAAAAAATATTAAAAAAAAAAAAAATTACCCTCTCCGAATCTGATTCCCAATTGTTCAACCCTTTTTTTTTTCTCAAAACTGCTTTCCGATCATC
GTTCAGAGATTGTGTTGTTGTTGTTTTTTTTTTCTGATATGGATTTTGATTCAAAATCAGGAAGAATATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGGGGAA
GAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCGACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAA
GGAGAAGAAGAACATCAACAGCAGCAGCAACCGGCGCAAGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCAGCAAGATCGTCGTTGGTGATGGTGAG
ATCGGGGAGAGGCGGGGGCAGCGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGCTCACATGCGATGTAGAACTTGTTGTAAAA
GCCGTGGGTTTGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCCTCTAAACGCCGTGACCGCCTCCTCCGTTCCGACGGCCTCAACTCCAAACGCCCTAAAGAC
ACCCACTACCACCCCACTTCTTCAGGGTTGGACATGGCGAATTTTCCGATGGAAGTGACCACACCGGCTGTCTTTCGGTGTGTACGAATGACAACCTTGGACGAAACCGA
CGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCCCCGCCCTCCTCCTCCTCCG
CCGCCGCATTGCTCGATTCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCTCCATCATCTTAGCAATGAATAGGTGAA
ATTGAAATGAAAAAAAGAAAATTAATTAATTAAGTGAGTGAAGGAATTGAAGTTTCGAGTTTGTATTAAAAGTATATAATTTTTTTTTTAAGAATAAATTTTTAAGCTTG
TAATTTTTCAAGGGAGAGTTTGCATTAATTTGCCGCCATTGTTGGAATTTCGATGCTCTTTTTTCTATTTTTTTTTTCAATTTCTTTTCCTTGTCCTGG
Protein sequenceShow/hide protein sequence
MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQA
KKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYD
HGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS