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IVF0001254 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001254
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr02:10688556..10688768
RNA-Seq ExpressionIVF0001254
SyntenyIVF0001254
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049656.1 hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa]1.97e-1782.98Show/hide
Query:  MKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQLWDQK
        MKEEEEVDA YVFK +D+FICKPL+RGFED FQCQSNLQEMQL  QK
Subjt:  MKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQLWDQK

KAA0062630.1 hypothetical protein E6C27_scaffold79G001410 [Cucumis melo var. makuwa]2.14e-2087.76Show/hide
Query:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQL
        +K+KEAMKEEEEVDA+YVFK MDEFICKPL+RGFED+FQCQSNLQEMQL
Subjt:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQL

KAE8646246.1 hypothetical protein Csa_023826, partial [Cucumis sativus]5.77e-1261.11Show/hide
Query:  KMKEAMKEE--EEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQLWDQK
        K KEA+KE+  E VD DY+F  ++  +CKP++ GFEDM Q QSNLQEMQLW QK
Subjt:  KMKEAMKEE--EEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQLWDQK

TYJ98052.1 hypothetical protein E5676_scaffold369G00020 [Cucumis melo var. makuwa]3.96e-1783.33Show/hide
Query:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQ
        +K+KEAMKEEEEVD +YVFK MDEFICK L+RGFED+FQCQSNLQEMQ
Subjt:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQ

TYK11947.1 hypothetical protein E5676_scaffold177G001300 [Cucumis melo var. makuwa]6.92e-1673.91Show/hide
Query:  KMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEM
        K+KEA++EEEEV ADYVF  +DE+ICKPL+RGF+D+FQC+SNLQEM
Subjt:  KMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEM

TrEMBL top hitse value%identityAlignment
A0A5A7V5X0 Uncharacterized protein1.0e-1587.76Show/hide
Query:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQL
        +K+KEAMKEEEEVDA+YVFK MDEFICKPL+RGFED+FQCQSNLQEMQL
Subjt:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQL

A0A5D3BE51 Uncharacterized protein2.1e-1383.33Show/hide
Query:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQ
        +K+KEAMKEEEEVD +YVFK MDEFICK L+RGFED+FQCQSNLQEMQ
Subjt:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQ

A0A5D3CJ32 Uncharacterized protein3.4e-1173.91Show/hide
Query:  KMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEM
        K+KEA++EEEEV ADYVF  +DE+ICKPL+RGF+D+FQC+SNLQEM
Subjt:  KMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEM

A0A5D3D645 Uncharacterized protein2.4e-1282.98Show/hide
Query:  MKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQLWDQK
        MKEEEEVDA YVFK +D+FICKPL+RGFED FQCQSNLQEMQL  QK
Subjt:  MKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQLWDQK

A0A5D3DFQ1 Uncharacterized protein3.5e-0878.95Show/hide
Query:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMF
        +K KEAM+EEEE DADYVFK MDEFICKPL+RGFE++F
Subjt:  QKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCAAGAAAAGTCTCCCTTCACCGCCGAAACAATTTCCAGAAGCCGCAAAAGATGAAAGAGGCGATGAAAGAAGAAGAAGAAGTTGACGCAGACTACGTCTTCAA
ACTCATGGATGAATTTATCTGTAAACCTTTGAAGAGAGGGTTTGAAGACATGTTCCAGTGTCAGAGTAACTTACAAGAGATGCAATTATGGGATCAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCAAGAAAAGTCTCCCTTCACCGCCGAAACAATTTCCAGAAGCCGCAAAAGATGAAAGAGGCGATGAAAGAAGAAGAAGAAGTTGACGCAGACTACGTCTTCAA
ACTCATGGATGAATTTATCTGTAAACCTTTGAAGAGAGGGTTTGAAGACATGTTCCAGTGTCAGAGTAACTTACAAGAGATGCAATTATGGGATCAAAAGTGA
Protein sequenceShow/hide protein sequence
MLARKVSLHRRNNFQKPQKMKEAMKEEEEVDADYVFKLMDEFICKPLKRGFEDMFQCQSNLQEMQLWDQK