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IVF0001277 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001277
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-H2 finger protein ATL39-like
Genome locationchr07:2660323..2660915
RNA-Seq ExpressionIVF0001277
SyntenyIVF0001277
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064334.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]2.86e-110100Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
        MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
Subjt:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

XP_008453063.1 PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo]7.33e-111100Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
        MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
Subjt:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

XP_022936829.1 RING-H2 finger protein ATL39-like [Cucurbita moschata]1.72e-8379.38Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFG
        M DPLLTLLFPMETMV ES+SPPV+ HYTVTLDLRTS+IFS +IILFFLFL+HVLSGFLQWFL  RR G    DVEA M EERR++RAEK+P    V+FG
Subjt:  MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFG

Query:  SEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        SE+MVRRRSEEECAICLEEF+AGENCQALPEC+HFFHS+CI+VWFSKKFTCPICR+C+AA
Subjt:  SEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

XP_022976597.1 RING-H2 finger protein ATL39-like [Cucurbita maxima]4.22e-8480Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFG
        M DPLLTLLFPMETMV ES+SPPV+ HYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQWFL  RR G    DVEA M EERR++RAEK+P    V+FG
Subjt:  MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFG

Query:  SEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        SE+MVRRRSEEECAICLEEF+AGENCQALPEC+HFFHS+CI+VWFSKKFTCPICR+C+AA
Subjt:  SEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

XP_031740449.1 RING-H2 finger protein ATL39-like [Cucumis sativus]1.12e-10594.34Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
        MGDPLLTLLFPMETMVPES SPPVLHYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRR+GGG EDVEAAMAEERR+KRAEKLPLPPTV+FGS
Subjt:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFL GENCQALPEC+HFFHSECI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

TrEMBL top hitse value%identityAlignment
A0A0A0L062 RING-type domain-containing protein2.7e-8094.34Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
        MGDPLLTLLFPMETMVPES SPPVLHYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRR+GGG EDVEAAMAEERR+KRAEKLPLPPTV+FGS
Subjt:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFL GENCQALPEC+HFFHSECI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

A0A1S3BVC7 RING-H2 finger protein ATL39-like3.1e-84100Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
        MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
Subjt:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

A0A5A7VAT0 RING-H2 finger protein ATL39-like3.1e-84100Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
        MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
Subjt:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

A0A5D3D9M0 RING-H2 finger protein ATL39-like3.1e-84100Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
        MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS
Subjt:  MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

A0A6J1IG67 RING-H2 finger protein ATL39-like7.9e-6480Show/hide
Query:  MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFG
        M DPLLTLLFPMETMV ES+SPPV+ HYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQWFL  RR G    DVEA M EERR++RAEK  +P  V+FG
Subjt:  MGDPLLTLLFPMETMVPESSSPPVL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFG

Query:  SEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        SE+MVRRRSEEECAICLEEF+AGENCQALPEC+HFFHS+CI+VWFSKKFTCPICR+C+AA
Subjt:  SEKMVRRRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

SwissProt top hitse value%identityAlignment
O64763 E3 ubiquitin-protein ligase ATL99.8e-1138.2Show/hide
Query:  DEDVEAAMAEERRMKR----AEKLPLPPTVKFGSEKMVR-RRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICR
        D D E+ +   RR+      AE +   PT  +   K VR  +   ECA+CL EF   E  + +P C H FH++C++VW S+  TCP+CR
Subjt:  DEDVEAAMAEERRMKR----AEKLPLPPTVKFGSEKMVR-RRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICR

P0C034 RING-H2 finger protein ATL104.4e-1130.39Show/hide
Query:  VEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRS------------------EEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRN
        +  A+    R   +E +P   + +  S K +++++                  +EEC ICL +F++GE  + LP+C+H FH  CI+ W  +  TCP CRN
Subjt:  VEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRS------------------EEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRN

Query:  CV
        C+
Subjt:  CV

P0C035 RING-H2 finger protein ATL602.8e-1046.94Show/hide
Query:  ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        ECA+CL + + G+  + LP C+H FH +CI++WF    TCP+CRN V +
Subjt:  ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

Q9LS99 RING-H2 finger protein ATL775.7e-1152.08Show/hide
Query:  EECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV
        EEC ICL +F+AGE  + LP+C+H FH  CI+ W ++  TCP CR+C+
Subjt:  EECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV

Q9XF63 RING-H2 finger protein ATL34.4e-1155.32Show/hide
Query:  ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV
        EC+ICL E + G+  + LP+C+H FH ECI++WF    TCPICRN V
Subjt:  ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV

Arabidopsis top hitse value%identityAlignment
AT1G49220.1 RING/U-box superfamily protein3.1e-1230.39Show/hide
Query:  VEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRS------------------EEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRN
        +  A+    R   +E +P   + +  S K +++++                  +EEC ICL +F++GE  + LP+C+H FH  CI+ W  +  TCP CRN
Subjt:  VEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRS------------------EEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRN

Query:  CV
        C+
Subjt:  CV

AT1G53820.1 RING/U-box superfamily protein2.0e-1146.94Show/hide
Query:  ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA
        ECA+CL + + G+  + LP C+H FH +CI++WF    TCP+CRN V +
Subjt:  ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA

AT1G72310.1 RING/U-box superfamily protein3.1e-1255.32Show/hide
Query:  ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV
        EC+ICL E + G+  + LP+C+H FH ECI++WF    TCPICRN V
Subjt:  ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV

AT2G35000.1 RING/U-box superfamily protein7.0e-1238.2Show/hide
Query:  DEDVEAAMAEERRMKR----AEKLPLPPTVKFGSEKMVR-RRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICR
        D D E+ +   RR+      AE +   PT  +   K VR  +   ECA+CL EF   E  + +P C H FH++C++VW S+  TCP+CR
Subjt:  DEDVEAAMAEERRMKR----AEKLPLPPTVKFGSEKMVR-RRSEEECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICR

AT3G18773.1 RING/U-box superfamily protein4.1e-1252.08Show/hide
Query:  EECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV
        EEC ICL +F+AGE  + LP+C+H FH  CI+ W ++  TCP CR+C+
Subjt:  EECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCAT
TATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAGACG
TGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGCCGTTGCCGCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAG
GAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAGTCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAAGAA
ATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG
mRNA sequenceShow/hide mRNA sequence
TTTATAAACAGACAATCTCCAAATCCCCAATTCCTCTCTTCTCCACCGTCTTCTTCACCAACAAAATCCTCATCCTCCATAGCCAACAAAGAAACTTAAAAACCTTCACA
ACAATGGGAGATCCATTACTGACACTTCTATTCCCCATGGAAACCATGGTCCCTGAATCTTCATCTCCTCCAGTCCTCCACTACACCGTAACCCTAGACCTCCGAACCTC
CATTATCTTCTCCTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTCGACGTCCGGCGAAGCGGAGGAGGCGATGAAG
ACGTGGAGGCGGCAATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGCCGTTGCCGCCGACTGTGAAGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAG
GAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGCAGTCATTTTTTTCATTCGGAGTGTATTGAGGTTTGGTTTAGCAA
GAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG
Protein sequenceShow/hide protein sequence
MGDPLLTLLFPMETMVPESSSPPVLHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGDEDVEAAMAEERRMKRAEKLPLPPTVKFGSEKMVRRRSEE
ECAICLEEFLAGENCQALPECSHFFHSECIEVWFSKKFTCPICRNCVAA