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IVF0001309 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001309
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSenescence-specific cysteine protease sag39
Genome locationchr06:10568134..10568430
RNA-Seq ExpressionIVF0001309
SyntenyIVF0001309
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048463.1 uncharacterized protein E6C27_scaffold61G00640 [Cucumis melo var. makuwa]3.43e-62100Show/hide
Query:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
        MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
Subjt:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL

KAA0067610.1 uncharacterized protein E6C27_scaffold485G00780 [Cucumis melo var. makuwa]2.98e-4480.21Show/hide
Query:  DNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
        D+F ATIE I+AEMA+MK+ VNL MR  GNQT N V SVSSK KIP+PKAFNGNRDVKELE FIFDM+QYFKASGT+S+ETKVTLASMHLSDDAKL
Subjt:  DNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL

KAE8649361.1 hypothetical protein Csa_019161, partial [Cucumis sativus]6.54e-3378.05Show/hide
Query:  ATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLA
        ATIETIKAEM   K+ VNL MR+VGNQT NQ   VSSKFKIPKPKA  GNRD KE+ENFIF ME+YFKASGTNS+ETKVTLA
Subjt:  ATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLA

TYK03491.1 uncharacterized protein E5676_scaffold121G001100 [Cucumis melo var. makuwa]1.70e-3972.92Show/hide
Query:  DNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
        D+FRATIETIK +M E+KI V L MR +GNQT NQV +VSS+ KIP+PKAF+ NRD KELENFI D++QYFKASG NS+ETKVTLA M+LSDDAKL
Subjt:  DNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL

WP_217833205.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]7.89e-4373.47Show/hide
Query:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
        + D+FRAT+ETI+AEM EMK  VNL MR VGNQT NQ  ++ ++FKIP+PKAF+GNRD K+LENFIFDM+QYFKASGT S+E KVTLASMHLSDDAKL
Subjt:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL

TrEMBL top hitse value%identityAlignment
A0A5A7VKA0 Uncharacterized protein1.7e-3280.21Show/hide
Query:  DNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
        D+F ATIE I+AEMA+MK+ VNL MR  GNQT N V SVSSK KIP+PKAFNGNRDVKELE FIFDM+QYFKASGT+S+ETKVTLASMHLSDDAKL
Subjt:  DNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL

A0A5D3BUS6 Uncharacterized protein5.1e-2972.92Show/hide
Query:  DNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
        D+FRATIETIK +M E+KI V L MR +GNQT NQV +VSS+ KIP+PKAF+ NRD KELENFI D++QYFKASG NS+ETKVTLA M+LSDDAKL
Subjt:  DNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL

A0A5D3DYE0 Uncharacterized protein6.0e-46100Show/hide
Query:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
        MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
Subjt:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL

A0A6J1D906 Reverse transcriptase6.2e-2762.24Show/hide
Query:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
        M ++F+ TI+T++AEM E+   VNL MR VGNQ  NQ +   +K K+P+PK FNGNRD K+LENF+FD+EQYFKA+GT S+E KVTLA+MHL+DDAKL
Subjt:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL

A0A6J1DK29 uncharacterized protein LOC1110218293.8e-2459.18Show/hide
Query:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL
        M ++F+ TI+T++AEM E+   VNL MR VGNQ  NQ +   +K K+P+PK FNGNR  K+LENF FD+EQYFK +GT S+  KVTLA+MHL+DDAKL
Subjt:  MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGACAACTTTAGAGCAACGATAGAGACAATTAAGGCTGAGATGGCTGAGATGAAAATTTATGTGAATTTAATGATGCGACTAGTGGGGAACCAGACCGAAAATCA
AGTACATAGTGTTTCAAGCAAGTTTAAGATCCCGAAACCCAAAGCCTTCAATGGGAACCGCGACGTTAAAGAGCTTGAAAATTTCATCTTTGATATGGAACAATACTTTA
AGGCTAGTGGAACTAACTCTAAAGAAACAAAGGTGACATTAGCCTCTATGCATTTGTCTGATGATGCAAAGCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGACAACTTTAGAGCAACGATAGAGACAATTAAGGCTGAGATGGCTGAGATGAAAATTTATGTGAATTTAATGATGCGACTAGTGGGGAACCAGACCGAAAATCA
AGTACATAGTGTTTCAAGCAAGTTTAAGATCCCGAAACCCAAAGCCTTCAATGGGAACCGCGACGTTAAAGAGCTTGAAAATTTCATCTTTGATATGGAACAATACTTTA
AGGCTAGTGGAACTAACTCTAAAGAAACAAAGGTGACATTAGCCTCTATGCATTTGTCTGATGATGCAAAGCTCTAG
Protein sequenceShow/hide protein sequence
MLDNFRATIETIKAEMAEMKIYVNLMMRLVGNQTENQVHSVSSKFKIPKPKAFNGNRDVKELENFIFDMEQYFKASGTNSKETKVTLASMHLSDDAKL