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IVF0001310 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001310
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr04:14819445..14820158
RNA-Seq ExpressionIVF0001310
SyntenyIVF0001310
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056810.1 Gag-pro-like protein [Cucumis melo var. makuwa]5.44e-14889.87Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLT  RGKSVTGISSQVEVDL+QVLEDM AYP GFT QRSS+PRMTY TQNPN ITQ ENHVSDPMSTPIT+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQ SRKRL+F+EERLRAIEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNG TCPKSHLVMYCRKMS YA+DDKLLIHCFQDSLVGP S 
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
        WY+QLDGSQVHRWKDLADSFLKQYKYNIDT PDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

TYK06464.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.22e-15291.98Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTY TQNPNPITQQ NHVSDPMSTPITE
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQGSRKRLEF+EERLRAI+GADMYGSIDA QLCLIS VVIP KFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA+DDKLLI C QD+LVG TSR
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
         YMQLDGSQVHRWKDLADSFLKQYKYNID  PDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

XP_008447676.1 PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo]4.87e-169100Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
        WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

XP_016902756.1 PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo]5.34e-15191.56Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDMPAYP GFTPQRSSSPRMTY TQNPNPITQQ NHVSDPMSTPITE
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQGSRKRLEF+EERLRAI+GADMYGSIDA QLCLIS VVIP KFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA+DDKLLI C QD+LVG TSR
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
         YMQLDGSQVHRWKDLADSFLKQYKYNID  PDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

XP_016903339.1 PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]8.50e-14991.98Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILEL T GR KSV GISSQVEVDLNQVLEDMPAYP GFTPQRSSSPRMTY TQNPNPITQQ +HVSDPMSTPIT+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQ SRKRLEF+EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYC+KMSAYA+DDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
        WYMQLDGSQVHRWKDLADSFLKQY YNID TPDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

TrEMBL top hitse value%identityAlignment
A0A1S3BHD8 uncharacterized protein LOC1034900852.0e-132100Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
        WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

A0A1S4E534 uncharacterized protein LOC1035028384.0e-12091.98Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILEL T GR KSV GISSQVEVDLNQVLEDMPAYP GFTPQRSSSPRMTY TQNPNPITQQ +HVSDPMSTPIT+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQ SRKRLEF+EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYC+KMSAYA+DDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
        WYMQLDGSQVHRWKDLADSFLKQY YNID TPDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

A0A5A7T401 Retrotrans_gag domain-containing protein4.0e-12091.98Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILEL T GR KSV GISSQVEVDLNQVLEDMPAYP GFTPQRSSSPRMTY TQNPNPITQQ +HVSDPMSTPIT+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQ SRKRLEF+EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYC+KMSAYA+DDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
        WYMQLDGSQVHRWKDLADSFLKQY YNID TPDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

A0A5A7U4N8 Gag-pro-like protein2.0e-132100Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
        WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

A0A5D3C562 Gag-pro-like protein9.8e-11991.98Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTY TQNPNPITQQ NHVSDPMSTPITE
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITE

Query:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQGSRKRLEF+EERLRAI+GADMYGSIDA QLCLIS VVIP KFKTP+FEKYNGTTCPKSHLVMYCRKMSAYA+DDKLLI C QD+LVG TSR
Subjt:  SGKKILEEQGSRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL
         YMQLDGSQVHRWKDLADSFLKQYKYNID  PDRLDL
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTTPDRLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAG
TGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGA
CTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGT
AGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGAT
TCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATA
AATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTT
TTAAAACAATATAAGTACAACATTGATACGACACCCGATCGCCTGGATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTTACTATTGGAAGAGGAAAGAG
TGTTACGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCGCAAAGGTCGTCTAGTCCTCGCATGA
CTTATTCTACACAAAATCCTAATCCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGT
AGTAGAAAAAGACTGGAATTCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGAT
TCCTCCTAAATTCAAGACTCCAAATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATA
AATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTT
TTAAAACAATATAAGTACAACATTGATACGACACCCGATCGCCTGGATCTTTAG
Protein sequenceShow/hide protein sequence
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQG
SRKRLEFVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSF
LKQYKYNIDTTPDRLDL