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IVF0001317 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001317
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-CH-type domain-containing protein
Genome locationchr04:31526434..31528746
RNA-Seq ExpressionIVF0001317
SyntenyIVF0001317
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK25001.1 E3 ubiquitin-protein ligase MARCH2-like [Cucumis melo var. makuwa]2.44e-10872.43Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
        MGPQEVSQSDIDLEQG                                   GG         +S PEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS

Query:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
        AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
Subjt:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS

Query:  FWRGHRFLNFLLACMKKVVSKRENQNKELAEFTAAKGPPENCL
        FWRGHRFLNFLLACM+K ++K    ++ +  F    G  E CL
Subjt:  FWRGHRFLNFLLACMKKVVSKRENQNKELAEFTAAKGPPENCL

XP_004137745.1 uncharacterized protein LOC101218915 [Cucumis sativus]1.13e-10277.21Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
        MGPQEVSQSDIDLEQG                                   GG         +S PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHS
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS

Query:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
        AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDS S
Subjt:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS

Query:  FWRGHRFLNFLLACM
        FW GHRFLNFLLACM
Subjt:  FWRGHRFLNFLLACM

XP_008442485.1 PREDICTED: uncharacterized protein LOC103486339 [Cucumis melo]2.52e-10678.6Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
        MGPQEVSQSDIDLEQG                                   GG         +S PEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS

Query:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
        AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
Subjt:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS

Query:  FWRGHRFLNFLLACM
        FWRGHRFLNFLLACM
Subjt:  FWRGHRFLNFLLACM

XP_022145623.1 uncharacterized protein LOC111015024 isoform X2 [Momordica charantia]1.60e-9573.02Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
        M   EVSQSDIDLEQG                                   GG         ++ PEVGVV DSRRVSSVSDRSVEVENENGITEIKVH 
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS

Query:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
        AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELTEQS ESNNASST  VAASIPSSDS S
Subjt:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS

Query:  FWRGHRFLNFLLACM
        FWRGHRFLNFLLACM
Subjt:  FWRGHRFLNFLLACM

XP_038904640.1 uncharacterized protein LOC120090971 [Benincasa hispida]6.86e-10477.67Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
        MGPQEVSQSDIDLEQG                                   GG         +S PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHS
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS

Query:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
        AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDS S
Subjt:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS

Query:  FWRGHRFLNFLLACM
        FWRGHRFLNFLLACM
Subjt:  FWRGHRFLNFLLACM

TrEMBL top hitse value%identityAlignment
A0A0A0LAC9 RING-CH-type domain-containing protein2.7e-8077.21Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
        MGPQEVSQSDIDLEQG                                   GG         +S PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHS
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS

Query:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
        AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDS S
Subjt:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS

Query:  FWRGHRFLNFLLACM
        FW GHRFLNFLLACM
Subjt:  FWRGHRFLNFLLACM

A0A1S3B5A7 uncharacterized protein LOC1034863394.5e-8378.6Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
        MGPQEVSQSDIDLEQG                                   GG         +S PEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS

Query:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
        AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
Subjt:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS

Query:  FWRGHRFLNFLLACM
        FWRGHRFLNFLLACM
Subjt:  FWRGHRFLNFLLACM

A0A5D3DN10 E3 ubiquitin-protein ligase MARCH2-like6.2e-8572.43Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
        MGPQEVSQSDIDLEQG                                   GG         +S PEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS

Query:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
        AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
Subjt:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS

Query:  FWRGHRFLNFLLACMKKVVSKRENQNKELAEFTAAKGPPENCL
        FWRGHRFLNFLLACM+K ++K    ++ +  F    G  E CL
Subjt:  FWRGHRFLNFLLACMKKVVSKRENQNKELAEFTAAKGPPENCL

A0A6J1CWG7 uncharacterized protein LOC111015024 isoform X27.6e-7573.02Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS
        M   EVSQSDIDLEQG                                   GG         ++ PEVGVV DSRRVSSVSDRSVEVENENGITEIKVH 
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHS

Query:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS
        AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELTEQS ESNNASST  VAASIPSSDS S
Subjt:  AKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHS

Query:  FWRGHRFLNFLLACM
        FWRGHRFLNFLLACM
Subjt:  FWRGHRFLNFLLACM

A0A6J1FUW7 uncharacterized protein LOC1114470722.5e-7371.76Show/hide
Query:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVG-VVPDSRRVSSVSDRSVEVENENGITEIKVH
        M P +VSQSDIDLEQG                                   GG         +S P VG VV DSRR+SS SDRSVEVENENGITEIKVH
Subjt:  MGPQEVSQSDIDLEQG---------------------------------IIGG---------LSAPEVG-VVPDSRRVSSVSDRSVEVENENGITEIKVH

Query:  SAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSH
          KVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHS+ARNILGPNEVE TEQSNESNNASSTT VAASIPSSD+ 
Subjt:  SAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSH

Query:  SFWRGHRFLNFLLACM
        SFWRGHRFLNFLLACM
Subjt:  SFWRGHRFLNFLLACM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein5.3e-2848.61Show/hide
Query:  SRRVSSV-SDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNE-V
        SR+VSSV S  S E+++++        +A  E+DCRICHLG+E++    G  IELGCSCKDDLA AH+ CAETWFKIKG+KTCEIC S+ARN+ G NE V
Subjt:  SRRVSSV-SDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNE-V

Query:  ELTEQSNESNNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM
          T +  E  N   T        ++   + W+  R +N +LACM
Subjt:  ELTEQSNESNNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM

AT5G01070.1 RING/FYVE/PHD zinc finger superfamily protein5.0e-1874Show/hide
Query:  ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNK
        E+DCRICHLGLES+  E G P+ LGCSCKDDL   HK CA+TWFKIKGNK
Subjt:  ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNK

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein1.1e-3056.14Show/hide
Query:  ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILG-PNEV-ELTEQSNESNNASSTTTVAASIPSSDSHSF
        E+DCRICHLGLES+  E G P+ LGCSCKDDL   HK CA+TWFKIKGNKTCEIC SIA+N     NE+ + T ++N  +  +  T    +   SD    
Subjt:  ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILG-PNEV-ELTEQSNESNNASSTTTVAASIPSSDSHSF

Query:  WRGHRFLNFLLACM
         RG+RFLNFLL CM
Subjt:  WRGHRFLNFLLACM

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein1.8e-4454.49Show/hide
Query:  SQSDIDLEQGIIGGLSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFK
        S  D D E     G    E  +V D  R S+ S  SVE++ E G+ E  VH ++ ERDCRICH+ L++ + ESG+PIELGCSCK DLAAAHKHCAETWFK
Subjt:  SQSDIDLEQGIIGGLSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFK

Query:  IKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM
        IKGNK CE+C SIA N++G  EVE  E  NE+N   + T   +     +  SFW+GHRFLNFLLACM
Subjt:  IKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM

AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein1.4e-2336.14Show/hide
Query:  SQSDIDLEQGIIGGLSAPEVGVVP--DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQES-------------------------
        S S +DLE    GG+ APE  +      RR      R  + + + G            RDCRICHL LE+N +                           
Subjt:  SQSDIDLEQGIIGGLSAPEVGVVP--DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQES-------------------------

Query:  ------GIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAA--SIPSSDSHSFWRGHRFLNFLLA
              G+P++LGCSCK DL  AH  CAETWFKIKGN TCEIC ++A N+ G       EQSN  + AS+ +  AA  S+  ++    W G   +NFLLA
Subjt:  ------GIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAA--SIPSSDSHSFWRGHRFLNFLLA

Query:  CM
         M
Subjt:  CM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGAATCATCGGCGGTCTGTCAGCGCCGGAGGTTGGGGTTGTTCCGGATTCTCGGCGAGTTTCGTC
GGTTTCGGATCGTTCTGTGGAGGTTGAAAATGAAAATGGGATTACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGA
GTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTAGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAAT
AAGACATGCGAGATTTGTCATTCCATTGCTCGAAATATTCTCGGACCAAATGAGGTTGAGCTAACAGAGCAGTCTAATGAATCCAACAACGCCTCCTCGACAACTACAGT
TGCTGCATCAATTCCCTCATCAGATAGCCATAGTTTCTGGCGTGGGCACCGGTTTCTGAATTTTCTGCTCGCTTGTATGAAGAAAGTAGTATCGAAACGGGAAAATCAGA
ACAAGGAACTTGCAGAATTTACAGCTGCAAAAGGCCCTCCAGAGAATTGCCTACAGAGTGTCCATAACTTCACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGAATCATCGGCGGTCTGTCAGCGCCGGAGGTTGGGGTTGTTCCGGATTCTCGGCGAGTTTCGTC
GGTTTCGGATCGTTCTGTGGAGGTTGAAAATGAAAATGGGATTACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGA
GTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTAGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAAT
AAGACATGCGAGATTTGTCATTCCATTGCTCGAAATATTCTCGGACCAAATGAGGTTGAGCTAACAGAGCAGTCTAATGAATCCAACAACGCCTCCTCGACAACTACAGT
TGCTGCATCAATTCCCTCATCAGATAGCCATAGTTTCTGGCGTGGGCACCGGTTTCTGAATTTTCTGCTCGCTTGTATGAAGAAAGTAGTATCGAAACGGGAAAATCAGA
ACAAGGAACTTGCAGAATTTACAGCTGCAAAAGGCCCTCCAGAGAATTGCCTACAGAGTGTCCATAACTTCACATAG
Protein sequenceShow/hide protein sequence
MGPQEVSQSDIDLEQGIIGGLSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGN
KTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMKKVVSKRENQNKELAEFTAAKGPPENCLQSVHNFT