; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001339 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001339
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent DNA helicase
Genome locationchr08:22951603..22967541
RNA-Seq ExpressionIVF0001339
SyntenyIVF0001339
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR004589 - DNA helicase, ATP-dependent, RecQ type
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041750.1 ATP-dependent DNA helicase RecQ-like [Cucumis melo var. makuwa]2.30e-17499.19Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFR--AEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYG
        MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFR  AEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYG
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFR--AEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYG

Query:  VKFFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHY
        VKFFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHY
Subjt:  VKFFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHY

Query:  GCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        GCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
Subjt:  GCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

TYK27040.1 ATP-dependent DNA helicase RecQ-like [Cucumis melo var. makuwa]2.27e-176100Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
        MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK

Query:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
        FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
Subjt:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC

Query:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
Subjt:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

TYK27057.1 ATP-dependent DNA helicase RecQ-like isoform X1 [Cucumis melo var. makuwa]6.56e-15588.93Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
        MTPEKACS+ +SFWSKLKK GICLFAVDEAHCISEWGH+FR EY+ LD  RDVLPGLPFVALTATA EKVRSDIIN LKMKDPQVTIGSFDRTNLFYGV+
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK

Query:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
         F R  LFMN+LVLDISKY+ASGGSTI+YC TIK VEQISK+L+EAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
Subjt:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC

Query:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKA  YCGES T
Subjt:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

XP_008442004.1 PREDICTED: ATP-dependent DNA helicase RecQ-like [Cucumis melo]5.67e-172100Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
        MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK

Query:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
        FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
Subjt:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC

Query:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
Subjt:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

XP_011653461.2 uncharacterized protein LOC101222268 [Cucumis sativus]8.02e-15891.39Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
        MTPEKACSLP+SFWSKLKKAGICLFAVDEAHCIS+WGHNFRAEYELLD+FRD+LPGLPFVALTATA EKVR+DIIN LKMKDPQVTIGSFDRTNLFYGVK
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK

Query:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
        FF   RL MNELVLDISKY+ SGGSTI+YCRTIK VEQISKSLKEAGISAGIYHAQM KESRAESHRLF+RDE+QVMVATVAFGMGIDKPN+R VIHYGC
Subjt:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC

Query:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCG+SPT
Subjt:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

TrEMBL top hitse value%identityAlignment
A0A1S3B4Q2 ATP-dependent DNA helicase1.8e-12387.7Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
        MTPEKACS+P+SFWSKLKKAGICLFAVDEAHCISEWGH+FR EY+ LD  RDVLPGLPFVALTATA EKVRSDIIN LKMKDPQVTIGSFDRTNLFYGVK
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK

Query:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
         F R  LFMNELVLDISKY+ASGGSTI+YC TIK VEQI K+L+EAGIS GIYH QMDK+SRAESHRLFIRDE+QVMVAT+AFGMGIDKPN+RQVIHYGC
Subjt:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC

Query:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKA+ YCGES T
Subjt:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

A0A1S3B4Q5 ATP-dependent DNA helicase3.6e-140100Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
        MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK

Query:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
        FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
Subjt:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC

Query:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
Subjt:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

A0A1S3B5D1 ATP-dependent DNA helicase3.1e-12388.93Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
        MTPEKACS+ +SFWSKLKK GICLFAVDEAHCISEWGH+FR EY+ LD  RDVLPGLPFVALTATA EKVRSDIIN LKMKDPQVTIGSFDRTNLFYGV+
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK

Query:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
         F R  LFMN+LVLDISKY+ASGGSTI+YC TIK VEQISK+L+EAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
Subjt:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC

Query:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKA  YCGES T
Subjt:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

A0A5A7TEL7 ATP-dependent DNA helicase RecQ-like1.2e-13899.19Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFR--AEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYG
        MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFR  AEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYG
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFR--AEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYG

Query:  VKFFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHY
        VKFFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHY
Subjt:  VKFFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHY

Query:  GCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        GCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
Subjt:  GCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

A0A5D3DUQ9 ATP-dependent DNA helicase RecQ-like3.6e-140100Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
        MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK

Query:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
        FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
Subjt:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC

Query:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
        PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT
Subjt:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESPT

SwissProt top hitse value%identityAlignment
O09053 Werner syndrome ATP-dependent helicase homolog1.9e-5346.81Show/hide
Query:  MTPEKACSLPLSFWSKLKKA-GICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLF--Y
        +TPE  CS  L    +L  + GI L AVDEAHCISEWGH+FR+ + +L   +  LP +P +AL+ATA   +R DII+ L +KDPQ+T   FDR NL+   
Subjt:  MTPEKACSLPLSFWSKLKKA-GICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLF--Y

Query:  GVKFFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIH
        G K     +     LV   S      G TI+YC + K  EQ++  L +  ++   YHA M    R + H  F+RDE+Q +VATVAFGMGI+K ++R+VIH
Subjt:  GVKFFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIH

Query:  YGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDF
        YG PK +ESYYQE GR GRDG+ S C L +  +DF
Subjt:  YGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDF

O93530 Werner syndrome ATP-dependent helicase homolog9.6e-5848.39Show/hide
Query:  MTPEKACSLPLSFWSKL-KKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGV
        MTPE  CS  +S    L  + GI L A+DEAHCISEWGH+FR+ Y  L   + +LP +P VALTATA   +R DI   L + +PQVT  SFDR NL+  V
Subjt:  MTPEKACSLPLSFWSKL-KKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGV

Query:  KFFKRPRLFMNELVLDISKYLASG----GSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQV
           K   + ++     I K   SG    G+TIVYC T K  EQ++  L + GI+ G YHA M  + R E H  F+RDE+  +VATVAFGMGI+KP++R+V
Subjt:  KFFKRPRLFMNELVLDISKYLASG----GSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQV

Query:  IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESP
        IHYG PK +ESYYQE GR GRDG+ S C   + ++D        GE P
Subjt:  IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGESP

P15043 ATP-dependent DNA helicase RecQ3.9e-5145.91Show/hide
Query:  LFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVKFFKRPRLFMNELVLDISKYLASG
        L AVDEAHCIS+WGH+FR EY  L   R   P LPF+ALTATA +  R DI+  L + DP + I SFDR N+ Y +    +P   +++L+  + +    G
Subjt:  LFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVKFFKRPRLFMNELVLDISKYLASG

Query:  GSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGCPKSLESYYQESGRCGRDGIASVC
         S I+YC +   VE  +  L+  GISA  YHA ++   RA+    F RD++Q++VATVAFGMGI+KPNVR V+H+  P+++ESYYQE+GR GRDG+ +  
Subjt:  GSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGCPKSLESYYQESGRCGRDGIASVC

Query:  WLYYTRSDFAKAELYCGESP
         L+Y  +D A       E P
Subjt:  WLYYTRSDFAKAELYCGESP

Q14191 Werner syndrome ATP-dependent helicase8.4e-5444.26Show/hide
Query:  MTPEKACSLPLSFWSKLK-KAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGV
        +TPE  CS  +    +L+   GI L AVDEAHCISEWGH+FR  +  L   +  LP +P VALTATA   +R DI+  L +++PQ+T   FDR NL+  V
Subjt:  MTPEKACSLPLSFWSKLK-KAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGV

Query:  KFFKRPRLFMNEL---VLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVI
        +  ++    + +L   ++  S +    G TI+YC + K  +Q++  L++  +S G YHA M   +R + H  F+RDE+Q ++AT+AFGMGI+K ++RQVI
Subjt:  KFFKRPRLFMNEL---VLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVI

Query:  HYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSD
        HYG PK +ESYYQE GR GRDG+ S C + +  +D
Subjt:  HYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSD

Q9CL21 ATP-dependent DNA helicase RecQ1.3e-5143.78Show/hide
Query:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK
        ++PEK   +  SF+  +    +   A+DEAHCIS+WGH+FR EY  L   +   P  P +ALTATA    R DI+ +L ++ P V IGSFDR N+ Y + 
Subjt:  MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVK

Query:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC
           +P   +   VL        G S I+YC +   VE+I++SL+  G+SA  YHA ++   R +  R F RD VQV+VAT+AFGMGI+K NVR V+H+  
Subjt:  FFKRPRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGC

Query:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFA
        P+S+ESYYQE+GR GRD + +   L+Y  +D+A
Subjt:  PKSLESYYQESGRCGRDGIASVCWLYYTRSDFA

Arabidopsis top hitse value%identityAlignment
AT1G10930.1 DNA helicase (RECQl4A)2.5e-4539.67Show/hide
Query:  MTPEKACSLP--LSFWSKLKKAG-ICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFY
        +TPEK       L     L   G +  F +DEAHC+S+WGH+FR +Y+ L   +   P +P +ALTATA   V+ D++  L + +  V   SF+R NL+Y
Subjt:  MTPEKACSLP--LSFWSKLKKAG-ICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFY

Query:  GVKFFKRPRLFMNELVLDISKYLASG---GSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQ
         V     P+    + + DI K++         I+YC +    E++S+ L+E G  A  YH  M+ E RA     + +DE+ ++ ATVAFGMGI+KP+VR 
Subjt:  GVKFFKRPRLFMNELVLDISKYLASG---GSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQ

Query:  VIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAE
        VIH+  PKS+E Y+QE GR GRDG  S C LYY   D+ + +
Subjt:  VIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAE

AT1G31360.1 RECQ helicase L23.1e-5145.76Show/hide
Query:  MTPEKACSLPLSFWSKLKK---AG-ICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLF
        +TPEK  S    F SKL+K   AG + L ++DEAHC S+WGH+FR +Y+ L   +   P +P VALTATA +KV++D+I  L +      + S +R NLF
Subjt:  MTPEKACSLPLSFWSKLKK---AG-ICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLF

Query:  YGVKFFKR-PRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQV
        Y V+      +L ++E+   I +  ++  S IVYC + K  EQI+  L+E GISA  YHA MD   R + H  + ++++QV+V TVAFGMGI+KP+VR V
Subjt:  YGVKFFKR-PRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQV

Query:  IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSD
        IH+   KS+E+YYQESGR GRDG+ S C L++  +D
Subjt:  IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSD

AT1G31360.2 RECQ helicase L23.1e-5145.76Show/hide
Query:  MTPEKACSLPLSFWSKLKK---AG-ICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLF
        +TPEK  S    F SKL+K   AG + L ++DEAHC S+WGH+FR +Y+ L   +   P +P VALTATA +KV++D+I  L +      + S +R NLF
Subjt:  MTPEKACSLPLSFWSKLKK---AG-ICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLF

Query:  YGVKFFKR-PRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQV
        Y V+      +L ++E+   I +  ++  S IVYC + K  EQI+  L+E GISA  YHA MD   R + H  + ++++QV+V TVAFGMGI+KP+VR V
Subjt:  YGVKFFKR-PRLFMNELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQV

Query:  IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSD
        IH+   KS+E+YYQESGR GRDG+ S C L++  +D
Subjt:  IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSD

AT4G35740.1 DEAD/DEAH box RNA helicase family protein2.3e-4643.3Show/hide
Query:  KLKKAGIC-LFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVKFFKRPRLFMNELVL
        KL   G+  L A+DEAHCIS WGH+FR  Y  L   RD L  +P +ALTATA  KV+ D+I+ L +++P V   SF+R N+FY V++    +  ++    
Subjt:  KLKKAGIC-LFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVKFFKRPRLFMNELVL

Query:  DISKYLASGGS--TIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGCPKSLESYYQESG
        D+   L S G+   I+YC      + +S  L   GIS+  YHA ++ + R+     ++  + Q++VATVAFGMGIDK +VR V H+  PKS+ES+YQESG
Subjt:  DISKYLASGGS--TIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGCPKSLESYYQESG

Query:  RCGRDGIASVCWLYYTRSDFAKAE
        R GRD + S   LYY   D  K E
Subjt:  RCGRDGIASVCWLYYTRSDFAKAE

AT4G35740.2 DEAD/DEAH box RNA helicase family protein2.3e-4643.3Show/hide
Query:  KLKKAGIC-LFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVKFFKRPRLFMNELVL
        KL   G+  L A+DEAHCIS WGH+FR  Y  L   RD L  +P +ALTATA  KV+ D+I+ L +++P V   SF+R N+FY V++    +  ++    
Subjt:  KLKKAGIC-LFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVKFFKRPRLFMNELVL

Query:  DISKYLASGGS--TIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGCPKSLESYYQESG
        D+   L S G+   I+YC      + +S  L   GIS+  YHA ++ + R+     ++  + Q++VATVAFGMGIDK +VR V H+  PKS+ES+YQESG
Subjt:  DISKYLASGGS--TIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGCPKSLESYYQESG

Query:  RCGRDGIASVCWLYYTRSDFAKAE
        R GRD + S   LYY   D  K E
Subjt:  RCGRDGIASVCWLYYTRSDFAKAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCAGAAAAGGCATGCTCTCTTCCCTTGAGTTTTTGGTCAAAATTAAAGAAGGCAGGAATTTGTTTGTTTGCCGTTGATGAAGCACACTGCATTTCCGAGTGGGG
GCATAATTTTAGGGCAGAATACGAACTGCTGGACGATTTTCGCGATGTTCTACCAGGTCTTCCATTTGTTGCACTGACTGCCACTGCACCTGAAAAGGTTCGGAGTGACA
TTATTAATTATTTGAAGATGAAAGACCCTCAAGTTACCATTGGTTCATTCGATCGAACAAATCTTTTCTATGGAGTCAAGTTTTTTAAGCGTCCTCGATTATTCATGAAT
GAGCTTGTGCTTGATATCTCTAAGTATCTAGCCTCTGGTGGTTCAACTATCGTTTACTGCAGGACAATTAAAGCTGTTGAGCAGATATCCAAGTCACTTAAAGAAGCAGG
GATTAGTGCTGGAATTTATCACGCTCAAATGGACAAAGAATCACGTGCAGAATCCCACAGACTATTTATAAGGGATGAAGTGCAAGTCATGGTTGCCACTGTTGCTTTTG
GTATGGGTATTGACAAACCAAATGTAAGACAGGTGATACATTATGGCTGCCCAAAGAGTCTAGAATCTTATTATCAGGAAAGTGGGCGATGTGGTAGAGATGGTATTGCT
TCTGTTTGCTGGCTTTATTACACGAGAAGTGATTTTGCTAAAGCAGAGCTCTACTGTGGTGAATCACCAACTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACACCAGAAAAGGCATGCTCTCTTCCCTTGAGTTTTTGGTCAAAATTAAAGAAGGCAGGAATTTGTTTGTTTGCCGTTGATGAAGCACACTGCATTTCCGAGTGGGG
GCATAATTTTAGGGCAGAATACGAACTGCTGGACGATTTTCGCGATGTTCTACCAGGTCTTCCATTTGTTGCACTGACTGCCACTGCACCTGAAAAGGTTCGGAGTGACA
TTATTAATTATTTGAAGATGAAAGACCCTCAAGTTACCATTGGTTCATTCGATCGAACAAATCTTTTCTATGGAGTCAAGTTTTTTAAGCGTCCTCGATTATTCATGAAT
GAGCTTGTGCTTGATATCTCTAAGTATCTAGCCTCTGGTGGTTCAACTATCGTTTACTGCAGGACAATTAAAGCTGTTGAGCAGATATCCAAGTCACTTAAAGAAGCAGG
GATTAGTGCTGGAATTTATCACGCTCAAATGGACAAAGAATCACGTGCAGAATCCCACAGACTATTTATAAGGGATGAAGTGCAAGTCATGGTTGCCACTGTTGCTTTTG
GTATGGGTATTGACAAACCAAATGTAAGACAGGTGATACATTATGGCTGCCCAAAGAGTCTAGAATCTTATTATCAGGAAAGTGGGCGATGTGGTAGAGATGGTATTGCT
TCTGTTTGCTGGCTTTATTACACGAGAAGTGATTTTGCTAAAGCAGAGCTCTACTGTGGTGAATCACCAACTGTATGA
Protein sequenceShow/hide protein sequence
MTPEKACSLPLSFWSKLKKAGICLFAVDEAHCISEWGHNFRAEYELLDDFRDVLPGLPFVALTATAPEKVRSDIINYLKMKDPQVTIGSFDRTNLFYGVKFFKRPRLFMN
ELVLDISKYLASGGSTIVYCRTIKAVEQISKSLKEAGISAGIYHAQMDKESRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIHYGCPKSLESYYQESGRCGRDGIA
SVCWLYYTRSDFAKAELYCGESPTV