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IVF0001340 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001340
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:14759672..14767256
RNA-Seq ExpressionIVF0001340
SyntenyIVF0001340
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043551.1 uncharacterized protein E6C27_scaffold335G00530 [Cucumis melo var. makuwa]2.65e-8587.33Show/hide
Query:  FRPSIFAKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE
        F P +F   KRREFLRLVQGDETVA+YGKKFMELARYAITFIMNEEDKCMHFE+GLRTSIRALVT CAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE
Subjt:  FRPSIFAKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE

Query:  SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAY
        SSPLLDR QEKEDNKEAEKWTMF FRQGSHWFGD RPR  ECGS  +  Y
Subjt:  SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAY

KAA0043557.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]4.42e-7392.68Show/hide
Query:  GDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLDRGQEKEDNKEAEK
         DETVAEYGKKFMELARY ITFIMNEEDKC HFEEGLRTSIRALVTAC GSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLDRGQEKEDNKEAEK
Subjt:  GDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLDRGQEKEDNKEAEK

Query:  WTMFCFRQGSHWFGDNRPRCSEC
        WTMF FRQGSHWF D RPR  EC
Subjt:  WTMFCFRQGSHWFGDNRPRCSEC

KAA0054739.1 uncharacterized protein E6C27_scaffold437G00090 [Cucumis melo var. makuwa]2.64e-4456.55Show/hide
Query:  AKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLD
        A+ KRRE L L Q D+TVA Y KKF +L +YAITFI++EE KC  F+E LRT+ RA+VT+ A   DFSKLVEA I  EKCL E DEEKM++ E+SSP +D
Subjt:  AKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLD

Query:  RGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAYT
        R +EK  +KE ++W   CF Q  HWF   RP+C ECG    HA+T
Subjt:  RGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAYT

TYJ99705.1 uncharacterized protein E5676_scaffold562G001040 [Cucumis melo var. makuwa]4.28e-4153.06Show/hide
Query:  AKLKRREFL--RLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPL
        AK+   +F+   + +GD+TVA Y KKF +L +YAITFI++EE KC  F+E LRT+ RA+VT+ A   DFSKLVEA I  EKCL E DEEKM++ E+SSP 
Subjt:  AKLKRREFL--RLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPL

Query:  LDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAYT
        +DR +EK  +KE ++W   CF Q  HWF   RP+C ECG    HA+T
Subjt:  LDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAYT

TYK02484.1 Retrotransposon gag protein [Cucumis melo var. makuwa]1.21e-8695.65Show/hide
Query:  FRPSIFAKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE
        F P +F   KRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE
Subjt:  FRPSIFAKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE

Query:  SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPR
        SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPR
Subjt:  SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPR

TrEMBL top hitse value%identityAlignment
A0A5A7TP59 Zf-CCHC domain-containing protein7.6e-5793.44Show/hide
Query:  DETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLDRGQEKEDNKEAEKW
        DETVAEYGKKFMELARY ITFIMNEEDKC HFEEGLRTSIRALVTAC GSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLDRGQEKEDNKEAEKW
Subjt:  DETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLDRGQEKEDNKEAEKW

Query:  TMFCFRQGSHWFGDNRPRCSEC
        TMF FRQGSHWF D RPR  EC
Subjt:  TMFCFRQGSHWFGDNRPRCSEC

A0A5A7TPS8 Retrotrans_gag domain-containing protein6.2e-6787.33Show/hide
Query:  FRPSIFAKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE
        F P +F   KRREFLRLVQGDETVA+YGKKFMELARYAITFIMNEEDKCMHFE+GLRTSIRALVT CAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE
Subjt:  FRPSIFAKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE

Query:  SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAY
        SSPLLDR QEKEDNKEAEKWTMF FRQGSHWFGD RPR  ECGS  +  Y
Subjt:  SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAY

A0A5A7UMQ3 Uncharacterized protein4.4e-3656.55Show/hide
Query:  AKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLD
        A+ KRRE L L Q D+TVA Y KKF +L +YAITFI++EE KC  F+E LRT+ RA+VT+ A   DFSKLVEA I  EKCL E DEEKM++ E+SSP +D
Subjt:  AKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLD

Query:  RGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAYT
        R +EK  +KE ++W   CF Q  HWF   RP+C ECG    HA+T
Subjt:  RGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAYT

A0A5D3BN18 Uncharacterized protein1.2e-3353.06Show/hide
Query:  AKLKRREFL--RLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPL
        AK+   +F+   + +GD+TVA Y KKF +L +YAITFI++EE KC  F+E LRT+ RA+VT+ A   DFSKLVEA I  EKCL E DEEKM++ E+SSP 
Subjt:  AKLKRREFL--RLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPL

Query:  LDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAYT
        +DR +EK  +KE ++W   CF Q  HWF   RP+C ECG    HA+T
Subjt:  LDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAYT

A0A5D3BTI8 Retrotransposon gag protein7.4e-6895.65Show/hide
Query:  FRPSIFAKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE
        F P +F   KRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE
Subjt:  FRPSIFAKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAGSLDFSKLVEAAIRIEKCLVEEDEEKMVEGEE

Query:  SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPR
        SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPR
Subjt:  SSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAGTTTGGGGGAAATAAAAACTTGTGTACCTTAACCAGCACATCTTCAATCTTGCCATCAGGCCACGAAATGGATCTATTAGGAAATTGGAGAGCCATTTATGA
TCACGGGTTTGATTTCAGACCGAGTATTTTTGCCAAACTCAAGAGAAGAGAATTTCTACGATTGGTACAAGGCGATGAGACTGTTGCGGAATATGGGAAGAAGTTTATGG
AGTTAGCAAGGTATGCAATAACCTTCATAATGAATGAAGAGGATAAGTGTATGCATTTTGAAGAAGGCCTAAGAACATCAATTCGAGCTTTAGTGACGGCATGTGCAGGC
TCGTTAGATTTTTCTAAGTTGGTTGAGGCAGCCATACGCATTGAGAAATGTTTGGTTGAGGAAGATGAAGAGAAAATGGTAGAAGGAGAAGAGTCAAGTCCATTGTTGGA
TAGAGGACAAGAAAAGGAAGACAACAAAGAAGCAGAGAAGTGGACTATGTTTTGCTTTAGGCAAGGATCGCATTGGTTTGGCGATAATAGACCAAGGTGTTCGGAGTGTG
GAAGTGCCACTCTTCATGCCTACACCTTGGTGGGAAAGGCTTACTGGAACTTTCTTGGCACTGGTACTTCAGCCCTTGCTCTAGTTATTGCCCCTTTCCCTTCATTGCCT
CTTCATTTGCTTCCCAAGGATGCCCATTTCCTCATCTACCACCTAATGCTGCTTCTTCAGATAGGGTACTTAGAGGTCAAGGTCTCACACATATTCCTTTTGCAGAATAT
ATTCTACGGTCAAGAATCTCTTTGTTTAGTATCCATGTCGGAAGGTCTTTATCGCGTTGGCAGTACTCCATCAGGGTCTCACAATAAATTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAAGTTTGGGGGAAATAAAAACTTGTGTACCTTAACCAGCACATCTTCAATCTTGCCATCAGGCCACGAAATGGATCTATTAGGAAATTGGAGAGCCATTTATGA
TCACGGGTTTGATTTCAGACCGAGTATTTTTGCCAAACTCAAGAGAAGAGAATTTCTACGATTGGTACAAGGCGATGAGACTGTTGCGGAATATGGGAAGAAGTTTATGG
AGTTAGCAAGGTATGCAATAACCTTCATAATGAATGAAGAGGATAAGTGTATGCATTTTGAAGAAGGCCTAAGAACATCAATTCGAGCTTTAGTGACGGCATGTGCAGGC
TCGTTAGATTTTTCTAAGTTGGTTGAGGCAGCCATACGCATTGAGAAATGTTTGGTTGAGGAAGATGAAGAGAAAATGGTAGAAGGAGAAGAGTCAAGTCCATTGTTGGA
TAGAGGACAAGAAAAGGAAGACAACAAAGAAGCAGAGAAGTGGACTATGTTTTGCTTTAGGCAAGGATCGCATTGGTTTGGCGATAATAGACCAAGGTGTTCGGAGTGTG
GAAGTGCCACTCTTCATGCCTACACCTTGGTGGGAAAGGCTTACTGGAACTTTCTTGGCACTGGTACTTCAGCCCTTGCTCTAGTTATTGCCCCTTTCCCTTCATTGCCT
CTTCATTTGCTTCCCAAGGATGCCCATTTCCTCATCTACCACCTAATGCTGCTTCTTCAGATAGGGTACTTAGAGGTCAAGGTCTCACACATATTCCTTTTGCAGAATAT
ATTCTACGGTCAAGAATCTCTTTGTTTAGTATCCATGTCGGAAGGTCTTTATCGCGTTGGCAGTACTCCATCAGGGTCTCACAATAAATTCTTCTAA
Protein sequenceShow/hide protein sequence
MTKFGGNKNLCTLTSTSSILPSGHEMDLLGNWRAIYDHGFDFRPSIFAKLKRREFLRLVQGDETVAEYGKKFMELARYAITFIMNEEDKCMHFEEGLRTSIRALVTACAG
SLDFSKLVEAAIRIEKCLVEEDEEKMVEGEESSPLLDRGQEKEDNKEAEKWTMFCFRQGSHWFGDNRPRCSECGSATLHAYTLVGKAYWNFLGTGTSALALVIAPFPSLP
LHLLPKDAHFLIYHLMLLLQIGYLEVKVSHIFLLQNIFYGQESLCLVSMSEGLYRVGSTPSGSHNKFF