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IVF0001356 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001356
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSenescence-specific cysteine protease sag39
Genome locationchr06:6397121..6397550
RNA-Seq ExpressionIVF0001356
SyntenyIVF0001356
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060734.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.21e-5788.79Show/hide
Query:  MTKNHAAKTSSRIFSTRHKNLHPIQSIHDSILSIRPKDSSHVIQSTRKHAAKRSSCILKTYHG----------ATQPWIKLGPKPYHNPISTSSPRLKFS
        MTKNHAAKTSSRIFSTRH NLHPIQSIHDSILSIRPKDSSHVIQSTRKHAAKRSSCIL TYHG          ATQPWIKLGPKPYHNPISTSSPRLKFS
Subjt:  MTKNHAAKTSSRIFSTRHKNLHPIQSIHDSILSIRPKDSSHVIQSTRKHAAKRSSCILKTYHG----------ATQPWIKLGPKPYHNPISTSSPRLKFS

Query:  DLRSRPLSATESPDKR
        DLRSRPLSATESPD R
Subjt:  DLRSRPLSATESPDKR
TYK09013.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]2.69e-2471.05Show/hide
Query:  VIQSTRKHAAKRSSCILKTYHG----------ATQPWIKLGPKPYHNPISTSSPRLKFSDLRSRPLSATESPDKRR
        +IQSTRK AAK SS IL TYHG          ATQPW+KLGPKPY+NP STSSPRL+FSDLRS P SATESPD RR
Subjt:  VIQSTRKHAAKRSSCILKTYHG----------ATQPWIKLGPKPYHNPISTSSPRLKFSDLRSRPLSATESPDKRR
TrEMBL top hitse value%identityAlignment
A0A5A7V094 Reverse transcriptase6.6e-4888.79Show/hide
Query:  MTKNHAAKTSSRIFSTRHKNLHPIQSIHDSILSIRPKDSSHVIQSTRKHAAKRSSCILKTYHG----------ATQPWIKLGPKPYHNPISTSSPRLKFS
        MTKNHAAKTSSRIFSTRH NLHPIQSIHDSILSIRPKDSSHVIQSTRKHAAKRSSCIL TYHG          ATQPWIKLGPKPYHNPISTSSPRLKFS
Subjt:  MTKNHAAKTSSRIFSTRHKNLHPIQSIHDSILSIRPKDSSHVIQSTRKHAAKRSSCILKTYHG----------ATQPWIKLGPKPYHNPISTSSPRLKFS

Query:  DLRSRPLSATESPDKR
        DLRSRPLSATESPD R
Subjt:  DLRSRPLSATESPDKR
A0A5D3CAY3 Senescence-specific cysteine protease sag392.4e-1871.05Show/hide
Query:  VIQSTRKHAAKRSSCILKTYHG----------ATQPWIKLGPKPYHNPISTSSPRLKFSDLRSRPLSATESPDKRR
        +IQSTRK AAK SS IL TYHG          ATQPW+KLGPKPY+NP STSSPRL+FSDLRS P SATESPD RR
Subjt:  VIQSTRKHAAKRSSCILKTYHG----------ATQPWIKLGPKPYHNPISTSSPRLKFSDLRSRPLSATESPDKRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAAAATCATGCGGCCAAAACTAGCTCACGCATATTTAGTACCCGCCACAAAAACCTCCATCCAATCCAATCCATCCATGATAGCATACTAAGCATACGACCCAA
GGATAGCTCACACGTGATCCAATCCACAAGGAAACACGCGGCCAAACGGAGCTCATGCATACTTAAAACCTACCACGGAGCCACCCAACCATGGATTAAGCTAGGCCCGA
AGCCATATCACAATCCTATATCCACGTCCTCACCTAGGCTCAAGTTCTCGGATCTCCGGTCACGGCCACTTTCAGCCACGGAATCCCCTGACAAACGTAGGTGGCGCTAC
AGAAAACATTCTCGTAGCCTTAAGGGTAATCACAACATCCATAATGTAACGTCCCGAATTTCGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAAAAATCATGCGGCCAAAACTAGCTCACGCATATTTAGTACCCGCCACAAAAACCTCCATCCAATCCAATCCATCCATGATAGCATACTAAGCATACGACCCAA
GGATAGCTCACACGTGATCCAATCCACAAGGAAACACGCGGCCAAACGGAGCTCATGCATACTTAAAACCTACCACGGAGCCACCCAACCATGGATTAAGCTAGGCCCGA
AGCCATATCACAATCCTATATCCACGTCCTCACCTAGGCTCAAGTTCTCGGATCTCCGGTCACGGCCACTTTCAGCCACGGAATCCCCTGACAAACGTAGGTGGCGCTAC
AGAAAACATTCTCGTAGCCTTAAGGGTAATCACAACATCCATAATGTAACGTCCCGAATTTCGAGCTAA
Protein sequenceShow/hide protein sequence
MTKNHAAKTSSRIFSTRHKNLHPIQSIHDSILSIRPKDSSHVIQSTRKHAAKRSSCILKTYHGATQPWIKLGPKPYHNPISTSSPRLKFSDLRSRPLSATESPDKRRWRY
RKHSRSLKGNHNIHNVTSRISS