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IVF0001362 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001362
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:25725002..25725256
RNA-Seq ExpressionIVF0001362
SyntenyIVF0001362
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033334.1 uncharacterized protein E6C27_scaffold845G001530 [Cucumis melo var. makuwa]7.01e-2065.67Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLA
        M V+EYE +F +LAK ALAFV+DE+DKC +FE GL  EI  SVM S NWLDF+KLVEATMR++  LA
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLA

KAA0039177.1 uncharacterized protein E6C27_scaffold121G00830 [Cucumis melo var. makuwa]5.72e-2356.98Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKG--ERRCGGQSGQ
        MIVDEYEKKFNE  KY  A V+D VD C  FEDGL IE+++ +M +S WLDFSKLV+A +R++R    +E  KG  E R  GQ GQ
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKG--ERRCGGQSGQ

KAA0054200.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]3.17e-51100Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKGERRCGGQSGQ
        MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKGERRCGGQSGQ
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKGERRCGGQSGQ

KAA0062762.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]9.69e-2060.29Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAE
        M V EYEK F ELAKYALAFVV+E DKC +FE+GL  EI A + +S +W DFSKLVE  M +++C+ E
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAE

TYK21573.1 uncharacterized protein E5676_scaffold275G00720 [Cucumis melo var. makuwa]1.75e-2067.16Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLA
        M VDEYE +F +LAK ALAFV+DE+DKC +FE GL  EI  SVM S NWLDF+KLVEATMR++  LA
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLA

TrEMBL top hitse value%identityAlignment
A0A5A7SQ53 Retrotrans_gag domain-containing protein1.8e-1465.67Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLA
        M V+EYE +F +LAK ALAFV+DE+DKC +FE GL  EI  SVM S NWLDF+KLVEATMR++  LA
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLA

A0A5A7V3F2 Zf-CCHC domain-containing protein8.8e-1460.29Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAE
        M V EYEK F ELAKYALAFVV+E DKC +FE+GL  EI A + +S +W DFSKLVE  M +++C+ E
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAE

A0A5D3CT88 Zf-CCHC domain-containing protein1.1e-37100Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKGERRCGGQSGQ
        MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKGERRCGGQSGQ
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKGERRCGGQSGQ

A0A5D3D4H4 Uncharacterized protein4.2e-1656.98Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKG--ERRCGGQSGQ
        MIVDEYEKKFNE  KY  A V+D VD C  FEDGL IE+++ +M +S WLDFSKLV+A +R++R    +E  KG  E R  GQ GQ
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKG--ERRCGGQSGQ

A0A5D3DDC6 Retrotrans_gag domain-containing protein6.1e-1567.16Show/hide
Query:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLA
        M VDEYE +F +LAK ALAFV+DE+DKC +FE GL  EI  SVM S NWLDF+KLVEATMR++  LA
Subjt:  MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTAGATGAATATGAAAAGAAATTCAATGAGTTAGCGAAGTATGCGTTAGCTTTTGTGGTAGATGAAGTTGACAAGTGTACGCAGTTTGAGGATGGTTTATTAAT
AGAGATTATAGCCTCAGTGATGGTCAGTTCTAATTGGTTAGACTTCTCAAAATTAGTTGAGGCAACCATGAGAATTAAAAGGTGTTTGGCCGAAGTGGAGAGTGCAAAGG
GTGAAAGAAGGTGTGGAGGTCAAAGTGGGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGTAGATGAATATGAAAAGAAATTCAATGAGTTAGCGAAGTATGCGTTAGCTTTTGTGGTAGATGAAGTTGACAAGTGTACGCAGTTTGAGGATGGTTTATTAAT
AGAGATTATAGCCTCAGTGATGGTCAGTTCTAATTGGTTAGACTTCTCAAAATTAGTTGAGGCAACCATGAGAATTAAAAGGTGTTTGGCCGAAGTGGAGAGTGCAAAGG
GTGAAAGAAGGTGTGGAGGTCAAAGTGGGCAATAG
Protein sequenceShow/hide protein sequence
MIVDEYEKKFNELAKYALAFVVDEVDKCTQFEDGLLIEIIASVMVSSNWLDFSKLVEATMRIKRCLAEVESAKGERRCGGQSGQ