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IVF0001386 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001386
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr12:9487067..9487234
RNA-Seq ExpressionIVF0001386
SyntenyIVF0001386
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]7.56e-2990.91Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYC+DVDDEDEGDSTY TTTAS+DIQYIETTNEWS+WRDDLAESMFT+WQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]6.48e-3092.73Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYCDD+DDEDEGDSTYATTTAS+DIQYIETTNEWS+WRDDLAESMFT+WQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
KAA0065928.1 retrotransposon protein [Cucumis melo var. makuwa]7.43e-30100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]7.29e-2989.09Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYCD+VDD+DEGDSTYATTTAS+DIQYIETTNEWS+WRDDLAESMFT+WQLRN 
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]1.07e-2890.91Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYC+DVDDEDEGDSTYATTTAS+DIQYIETTNEWS+WRDDLAESMFT WQLRN+
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SMB5 Retrotransposon protein2.2e-2192.73Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYCDDVDDEDEGDSTYATTTAS+DIQYIETTNEWS+W DDLAESMFT+WQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
A0A5A7TUU4 Retrotransposon protein2.9e-2192.73Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYCDDV+DEDEGDSTYATTTAS+DIQYIETTNEWS+WRDDLAESMFT WQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
A0A5A7UG16 Retrotransposon protein1.7e-2192.73Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYCDDV+DEDEGDSTYATTTAS+DIQYIETTNEWS+WRDDLAESMFT+WQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
A0A5A7V4Q8 Retrotransposon protein7.5e-2292.73Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYCDD+DDEDEGDSTYATTTAS+DIQYIETTNEWS+WRDDLAESMFT+WQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
A0A5A7VE09 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
        MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGACGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAAAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTGA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCAAATGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGACGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAAAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTGA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCAAATGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDDEDEGDSTYATTTASKDIQYIETTNEWSEWRDDLAESMFTKWQLRNA