CuGenDBv2

Gene ID	IVF0001409
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Actin T1-like protein
Genome location	chr04:30650824..30653083
RNA-Seq Expression	IVF0001409
Synteny	IVF0001409
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008442705.1 PREDICTED: uncharacterized protein LOC103486497 [Cucumis melo]

1.13e-74

100

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

XP_022144660.1 uncharacterized protein LOC111014295 [Momordica charantia]

8.65e-70

92.93

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPH DP RF NIWIG+A FSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAR+KNQPYQFKWNQYMDKDHRDSYYFNWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

XP_022934761.1 uncharacterized protein LOC111441842 [Cucurbita moschata]

1.68e-67

90.91

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPHTDP RF NIWIG+A FS+LTW NPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDK HRDSYY+NWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

XP_023529054.1 uncharacterized protein LOC111791803 [Cucurbita pepo subsp. pepo]

1.18e-67

91.92

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPHTDP RF NIWIG+A FSVLTW NPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDK HRDSYY+NWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

XP_038903427.1 uncharacterized protein LOC120090020 [Benincasa hispida]

6.09e-70

92.93

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPHTDP RF NIWIG+A FSV TWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAR+KNQPYQFKWNQYMDKDHRDSYYFNWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B6B6 uncharacterized protein LOC103486497

1.7e-56

100

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

A0A6J1CS98 uncharacterized protein LOC111014295

8.7e-53

92.93

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPH DP RF NIWIG+A FSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAR+KNQPYQFKWNQYMDKDHRDSYYFNWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

A0A6J1F2Q8 uncharacterized protein LOC111441842

4.8e-51

90.91

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPHTDP RF NIWIG+A FS+LTW NPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDK HRDSYY+NWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

A0A6J1J1C9 uncharacterized protein LOC111481799

4.8e-51

90.91

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPHTDP RF NIWIG+A FS+LTW NPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDK HRDSYY+NWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

A0A6P8DKX4 uncharacterized protein LOC116208603

1.1e-50

88.89

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPH DP RF NIWIG+A FS LTWFNPYMWQL+NQFNWHDKAFLFEQYHWKKAR KNQPY+FKWN+YMDKDHRDSYYFNWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G09860.1 unknown protein

6.6e-45

78.79

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Query:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP
        MEKYFGNAYRGDPGVPH D  RF NIWIG+A FSVLTW NPYMWQLSNQFN+HDK  LFEQYHWKKAR K QPY+FKWN+ + K+ RDSYY+NWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

Sequences

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CDS sequence

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ATGGAGAAGTACTTCGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACACCGACCCAGGTCGTTTTTTCAACATTTGGATTGGAGCCGCCGGGTTTTCTGTTCTTAC
ATGGTTCAATCCCTACATGTGGCAACTCTCCAATCAATTCAATTGGCATGACAAAGCGTTTTTGTTTGAGCAATACCACTGGAAAAAGGCTCGTGAAAAGAATCAGCCAT
ACCAGTTCAAGTGGAATCAATACATGGACAAGGACCACCGGGATTCCTATTATTTTAACTGGCCTATTTACTTTCCTTAG

mRNA sequence

Show/hide mRNA sequence

CACAGATGGGGTACCATGGCGGTAGATACTAGATAAGCCGATAGGACCGAAAACCAGAAAGTTCTGAGAAGCCAAAGCGAGAGATAGAGAGACGAAGGAATGGAGAAGTA
CTTCGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACACCGACCCAGGTCGTTTTTTCAACATTTGGATTGGAGCCGCCGGGTTTTCTGTTCTTACATGGTTCAATC
CCTACATGTGGCAACTCTCCAATCAATTCAATTGGCATGACAAAGCGTTTTTGTTTGAGCAATACCACTGGAAAAAGGCTCGTGAAAAGAATCAGCCATACCAGTTCAAG
TGGAATCAATACATGGACAAGGACCACCGGGATTCCTATTATTTTAACTGGCCTATTTACTTTCCTTAGGTTTCTGATTATGTAAGAAAACTGTTGCGTGACTGCTTAGT
TATTTTCTTCGTTTGGGTGGCAAAGACAGATTACTATTGCACCAAGACTTGAAGGGTTATGAATGTGTGGAATCATATTTCTTTTGGCTCGTTATTCAAACGGCATGCAT
GTGGTCATTCTATACTGTAGTAATGATTTTGACAATGGAAGAACCGTACCAAATACCTTTTCCTGTTATATGATAAAGATCTGAAGGGACGTTATATAATTTATATCATT
CTGAAAAGGAACATAAAAACTAAAAAAACTGGGTGGTCAGATGTTCAAATGAGATTTTAACTTCCTCTTTCATGATCAATAGATAATATAACGTAGTCAAGTGGAATTAT
GTTATCATCTATAGATCTTAGATTCTGATAACTTCTTGCTTATCTCTTACCATA

Protein sequence

Show/hide protein sequence

MEKYFGNAYRGDPGVPHTDPGRFFNIWIGAAGFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAREKNQPYQFKWNQYMDKDHRDSYYFNWPIYFP

IVF0001409 (gene) of Melon (IVF77) v1 genome