CuGenDBv2

Gene ID	IVF0001471
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein of unknown function (DUF3464)
Genome location	chr06:862098..862650
RNA-Seq Expression	IVF0001471
Synteny	IVF0001471
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021855 - PAM68-like

Homology

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GenBank top hits

e value

%identity

Alignment

TYK23016.1 putative Sterol regulatory element-binding protein cleavage-activating protein [Cucumis melo var. makuwa]

3.09e-85

77.72

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV
        MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQ N +                +  SGQNNNEDDDDEIPEAVYSRIITRILAFV
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV

Query:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        GIPMAFG   L               IWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEEDEVSR
Subjt:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

XP_004150568.1 uncharacterized protein PAM68-like [Cucumis sativus]

7.87e-71

70.56

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTT-SRGQVQRN-----------RREKPSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPM
        MKS  CSF QALLL  PPP NQRT+IIN STIT N +NFT T SRGQVQ N           +  + + QNNNEDDDDEIPEAVYSRIITRILAFVGIPM
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTT-SRGQVQRN-----------RREKPSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPM

Query:  AFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        AFG   L               IWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEEDE  R
Subjt:  AFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

XP_008439311.1 PREDICTED: uncharacterized protein PAM68-like [Cucumis melo]

8.85e-85

77.72

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV
        MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKN SNFTTTSRGQVQ N +                +  SGQNNNEDDDDEIPEAVYSRIITRILAFV
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV

Query:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        GIPMAFG   L               IWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
Subjt:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

XP_022944901.1 uncharacterized protein PAM68-like [Cucurbita moschata]

2.18e-58

60.43

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNED---DDDEIPEAVYSRIITRIL
        MK+  CSFR AL L KPPP  QR+ I +DST TKN   FT TSRGQ+Q N +                +KPSGQNN+ D   DDDEIPEAV  RIITRIL
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNED---DDDEIPEAVYSRIITRIL

Query:  AFVGIPMAFGT------------KPLGCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        AFVG+PMAFG             K     IW+PF T FLTFGASTMGIAYGTLSTSLDPEK+G++ GW+EAQKNWVEMWKEEDE +R
Subjt:  AFVGIPMAFGT------------KPLGCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

XP_038877436.1 uncharacterized protein PAM68-like [Benincasa hispida]

6.84e-66

67.57

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNN-EDDDDEIPEAVYSRIITRILAF
        MK+  CSF QALLL KPPP NQR+ I NDSTITK  SNFT  SRGQVQ N +                +K SGQNN  EDDDDEIPEAVYSRIITRILAF
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNN-EDDDDEIPEAVYSRIITRILAF

Query:  VGIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        VG+PMAFG   L               IW+PF TTFLTFGASTMGIAYGTLSTSLDPEKKGSV GWEEAQKNWVEMWKEEDE +R
Subjt:  VGIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLM4 Uncharacterized protein

2.3e-55

70.56

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFT-TTSRGQVQRN-----------RREKPSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPM
        MKS  CSF QALLL  PPP NQRT+IIN STIT N +NFT T SRGQVQ N           +  + + QNNNEDDDDEIPEAVYSRIITRILAFVGIPM
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFT-TTSRGQVQRN-----------RREKPSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPM

Query:  AFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        AFG   L               IWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEEDE  R
Subjt:  AFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

A0A1S3AZ57 uncharacterized protein PAM68-like

4.9e-66

77.72

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV
        MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKN SNFTTTSRGQVQ N +                +  SGQNNNEDDDDEIPEAVYSRIITRILAFV
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV

Query:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        GIPMAFG   L               IWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
Subjt:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

A0A5A7STB5 Putative Sterol regulatory element-binding protein cleavage-activating protein

4.9e-66

77.72

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV
        MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKN SNFTTTSRGQVQ N +                +  SGQNNNEDDDDEIPEAVYSRIITRILAFV
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV

Query:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        GIPMAFG   L               IWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
Subjt:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

A0A5D3DHC5 Putative Sterol regulatory element-binding protein cleavage-activating protein

2.2e-66

77.72

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV
        MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQ N +                +  SGQNNNEDDDDEIPEAVYSRIITRILAFV
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNEDDDDEIPEAVYSRIITRILAFV

Query:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        GIPMAFG   L               IWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEEDEVSR
Subjt:  GIPMAFGTKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

A0A6J1FZC0 uncharacterized protein PAM68-like

7.3e-46

60.43

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Query:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNED---DDDEIPEAVYSRIITRIL
        MK+  CSFR AL L KPPP  QR+  I+DST TKN   FT TSRGQ+Q N +                +KPSGQNN+ D   DDDEIPEAV  RIITRIL
Subjt:  MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRR----------------EKPSGQNNNED---DDDEIPEAVYSRIITRIL

Query:  AFVGIPMAFGT------------KPLGCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR
        AFVG+PMAFG             K     IW+PF T FLTFGASTMGIAYGTLSTSLDPEK+G++ GW+EAQKNWVEMWKEEDE +R
Subjt:  AFVGIPMAFGT------------KPLGCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

SwissProt top hits

e value

%identity

Alignment

O49668 Protein PAM68, chloroplastic

2.7e-13

33.85

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Query:  QVQRNRREKPSGQNN------NEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGT------------KPLGCAIWVPFFTTFLTFGASTMGIAY
        + +++++ KP  Q++      +EDDDDE        IPE V +R+I+R+   VG+P+  G               +    WVPF  +F+ FG +  G++Y
Subjt:  QVQRNRREKPSGQNN------NEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGT------------KPLGCAIWVPFFTTFLTFGASTMGIAY

Query:  GTLSTSLDPEKKGSVMGWEEAQKNWVEMWK
        G +S+S DP ++GS++GW EA+KNW   W+
Subjt:  GTLSTSLDPEKKGSVMGWEEAQKNWVEMWK

Q9LTD9 Uncharacterized protein PAM68-like

2.1e-18

36.05

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Query:  MKSFGCSFRQALLLP---------KPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRREKPSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFG
        M++  CS R   LLP         K    N +T+  N+    +  S      +G       EKP   + + +DD  IP+ V+ R++ RI+  VG P+  G
Subjt:  MKSFGCSFRQALLLP---------KPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRREKPSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFG

Query:  TKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE
           L               +WVP+ TT +TFG+S +GIAYG+LST+LDP K  S+ G +EA++NWVEMWKE+
Subjt:  TKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE

Arabidopsis top hits

e value

%identity

Alignment

AT4G19100.1 Protein of unknown function (DUF3464)

1.9e-14

33.85

Show/hide

Query:  QVQRNRREKPSGQNN------NEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGT------------KPLGCAIWVPFFTTFLTFGASTMGIAY
        + +++++ KP  Q++      +EDDDDE        IPE V +R+I+R+   VG+P+  G               +    WVPF  +F+ FG +  G++Y
Subjt:  QVQRNRREKPSGQNN------NEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGT------------KPLGCAIWVPFFTTFLTFGASTMGIAY

Query:  GTLSTSLDPEKKGSVMGWEEAQKNWVEMWK
        G +S+S DP ++GS++GW EA+KNW   W+
Subjt:  GTLSTSLDPEKKGSVMGWEEAQKNWVEMWK

AT5G52780.1 Protein of unknown function (DUF3464)

1.5e-19

36.05

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Query:  MKSFGCSFRQALLLP---------KPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRREKPSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFG
        M++  CS R   LLP         K    N +T+  N+    +  S      +G       EKP   + + +DD  IP+ V+ R++ RI+  VG P+  G
Subjt:  MKSFGCSFRQALLLP---------KPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRREKPSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFG

Query:  TKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE
           L               +WVP+ TT +TFG+S +GIAYG+LST+LDP K  S+ G +EA++NWVEMWKE+
Subjt:  TKPL------------GCAIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE

Sequences

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CDS sequence

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ATGAAATCCTTTGGGTGTTCCTTTCGCCAGGCTCTCCTCCTTCCAAAGCCTCCGCCACGGAATCAAAGAACCGTAATAATCAACGACTCAACAATCACAAAGAATCGCAG
CAATTTCACAACAACATCCAGAGGCCAAGTCCAAAGAAACCGCCGCGAAAAACCTTCCGGCCAAAATAACAACGAAGACGACGACGATGAAATTCCGGAAGCCGTATACA
GTAGGATTATAACGAGAATCTTGGCATTTGTCGGGATTCCGATGGCGTTCGGAACAAAACCTTTGGGATGTGCTATTTGGGTACCATTTTTTACTACTTTCCTGACATTT
GGAGCTTCGACAATGGGAATTGCTTACGGGACCTTATCGACGAGTTTGGATCCGGAGAAGAAAGGATCTGTGATGGGATGGGAAGAGGCCCAGAAGAATTGGGTTGAAAT
GTGGAAGGAGGAAGATGAAGTCAGTCGTTAA

mRNA sequence

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Protein sequence

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MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQRNRREKPSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGTKPLGCAIWVPFFTTFLTF
GASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR

IVF0001471 (gene) of Melon (IVF77) v1 genome