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IVF0001482 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001482
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag protease polyprotein
Genome locationchr09:9753224..9753454
RNA-Seq ExpressionIVF0001482
SyntenyIVF0001482
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032209.1 gag protease polyprotein [Cucumis melo var. makuwa]2.00e-3894.52Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAP
        MPPRRGARRGGRGG+GRGAGRVHPEVQPVAQATDPAA +THADLAAMEQRFRDLIMQMREQQQPAPPAP PAP
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAP
KAA0036867.1 gag protease polyprotein [Cucumis melo var. makuwa]7.30e-3995.95Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV
        MPPRRGARRGGRGG+GRGAGRV PEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAP PAPV
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV
KAA0052196.1 gag protease polyprotein [Cucumis melo var. makuwa]1.50e-3792.11Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
        M PRRG R GGRGGQGRGAGRV P+VQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAP PAPVVP
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
KAA0066618.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.90e-3898.68Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
        MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV P
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
TYK14194.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.90e-3898.68Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
        MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV P
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
TrEMBL top hitse value%identityAlignment
A0A5A7T5I2 Gag protease polyprotein2.3e-2995.95Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV
        MPPRRGARRGGRGG+GRGAGRV PEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAP PAPV
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV
A0A5A7V810 Reverse transcriptase2.3e-2995.95Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV
        MPPRRGARRGGRGG+GRGAGRV PEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAP PAPV
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV
A0A5A7VEB0 Gag protease polyprotein2.3e-2995.95Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV
        MPPRRGARRGGRGG+GRGAGRV PEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAP PAPV
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV
A0A5A7VFU5 Reverse transcriptase1.9e-3198.68Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
        MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV P
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
A0A5D3CT34 Reverse transcriptase1.9e-3198.68Show/hide
Query:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
        MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPV P
Subjt:  MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCAAGGAAGAGGAGCAGGACGTGTCCACCCTGAAGTACAGCCTGTAGCCCAAGCCACCGACCCTGCTGC
ACCAGTTACTCATGCGGACCTAGCTGCTATGGAGCAAAGGTTCAGGGATTTGATTATGCAGATGCGGGAGCAACAGCAGCCTGCCCCGCCAGCTCCTACTCCAGCTCCAG
TTGTACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCAAGGAAGAGGAGCAGGACGTGTCCACCCTGAAGTACAGCCTGTAGCCCAAGCCACCGACCCTGCTGC
ACCAGTTACTCATGCGGACCTAGCTGCTATGGAGCAAAGGTTCAGGGATTTGATTATGCAGATGCGGGAGCAACAGCAGCCTGCCCCGCCAGCTCCTACTCCAGCTCCAG
TTGTACCCTAG
Protein sequenceShow/hide protein sequence
MPPRRGARRGGRGGQGRGAGRVHPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPTPAPVVP