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IVF0001489 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001489
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationchr01:29623324..29623692
RNA-Seq ExpressionIVF0001489
SyntenyIVF0001489
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]1.21e-66100Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLC
        MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLC
Subjt:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLC

Query:  ICIFLGLFL
        ICIFLGLFL
Subjt:  ICIFLGLFL

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]3.02e-1751.28Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLTS--------HSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVAS
        MAA++ LVS+ALLALL FSESL  S        +SLTG+  RN+L T AH+I + SVESS +RK N +H K  RR+RP+           SA NRSR+AS
Subjt:  MAAIRPLVSIALLALLFFSESLLTS--------HSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVAS

Query:  FEVGSMLCICIFLGLFL
          VGS+L +   LGLFL
Subjt:  FEVGSMLCICIFLGLFL

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]7.13e-1348.74Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLTSH--------SLTGIPHRNILHTVA--HRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRV
        MAAI+ L+SIAL+ALL F ESL TS         SL GI  RNI+ T A  H++         ++K N +H K R R+RP+LI    G    SA NRSR 
Subjt:  MAAIRPLVSIALLALLFFSESLLTSH--------SLTGIPHRNILHTVA--HRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRV

Query:  ASFEVGSMLCICIFLGLFL
        A   VGSMLCI + LGLFL
Subjt:  ASFEVGSMLCICIFLGLFL

XP_008451651.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]4.53e-5387.27Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFE------
        MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFE      
Subjt:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFE------

Query:  ---VGSMLCI
           +G ++C+
Subjt:  ---VGSMLCI

XP_008451666.1 PREDICTED: protein no-on-transient A-like [Cucumis melo]8.51e-1341.1Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLT---------SHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTK----------------------------
        MAAI+  + I+LLALLFF E L           S+S+TG+ HR IL T AH+    +VESS +RK N +H K                            
Subjt:  MAAIRPLVSIALLALLFFSESLLT---------SHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTK----------------------------

Query:  DRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLCICIFLGLFL
        DR   R  L  G  G HHKSA NRS VASF VG +L I   LGLF+
Subjt:  DRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLCICIFLGLFL

TrEMBL top hitse value%identityAlignment
A0A0A0K929 Uncharacterized protein5.9e-3580.7Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVE-SSYQ-RKSNKLHTKD--RRRIRPILISGSNGMHHKSAENR-SRVASFEV
        MAAIRPL+SIA LAL FFSESLLTSHSLTGIPHR IL+T AHRIV+GSVE SSYQ RKSNKLH KD  +RR  PIL+S SNG HHKSA NR S VAS EV
Subjt:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVE-SSYQ-RKSNKLHTKD--RRRIRPILISGSNGMHHKSAENR-SRVASFEV

Query:  GSMLCICIFLGLFL
        GSMLCICIFLGLFL
Subjt:  GSMLCICIFLGLFL

A0A0A0KAQ7 Uncharacterized protein1.5e-0643.59Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLT--------SHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVAS
        MAAI+ L+SI+LLALLFFSESL T        S+S+T +  RNIL T  H I +   + + + K   L      R RPI      G    SA NRSRV S
Subjt:  MAAIRPLVSIALLALLFFSESLLT--------SHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVAS

Query:  FEVGSMLCICIFLGLFL
        F +G +L    F GL L
Subjt:  FEVGSMLCICIFLGLFL

A0A1S3BRF6 protein no-on-transient A-like6.6e-1041.1Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLT---------SHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTK----------------------------
        MAAI+  + I+LLALLFF E L           S+S+TG+ HR IL T AH+    +VESS +RK N +H K                            
Subjt:  MAAIRPLVSIALLALLFFSESLLT---------SHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTK----------------------------

Query:  DRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLCICIFLGLFL
        DR   R  L  G  G HHKSA NRS VASF VG +L I   LGLF+
Subjt:  DRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLCICIFLGLFL

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like2.2e-4287.27Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFE------
        MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFE      
Subjt:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFE------

Query:  ---VGSMLCI
           +G ++C+
Subjt:  ---VGSMLCI

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like7.7e-51100Show/hide
Query:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLC
        MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLC
Subjt:  MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLC

Query:  ICIFLGLFL
        ICIFLGLFL
Subjt:  ICIFLGLFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGGCAACCAAAAAACGGAAACTCAATTTTCCAAATGGCTGCCATTAGACCTCTAGTTTCCATAGCTCTCTTGGCTCTTCTCTTCTTTTCCGAATCCCTACTCAC
TTCCCATTCTCTAACCGGAATTCCTCACCGGAACATCTTGCACACCGTGGCGCATCGGATTGTCAATGGCAGTGTTGAGTCCTCCTACCAAAGGAAGTCGAATAAGCTTC
ATACAAAAGATAGAAGGCGGATTCGACCGATACTAATCAGCGGCAGCAACGGCATGCATCACAAATCGGCAGAGAATCGGAGTCGAGTAGCGTCCTTTGAGGTTGGATCT
ATGTTGTGTATCTGCATTTTCTTGGGATTGTTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATGGCAACCAAAAAACGGAAACTCAATTTTCCAAATGGCTGCCATTAGACCTCTAGTTTCCATAGCTCTCTTGGCTCTTCTCTTCTTTTCCGAATCCCTACTCAC
TTCCCATTCTCTAACCGGAATTCCTCACCGGAACATCTTGCACACCGTGGCGCATCGGATTGTCAATGGCAGTGTTGAGTCCTCCTACCAAAGGAAGTCGAATAAGCTTC
ATACAAAAGATAGAAGGCGGATTCGACCGATACTAATCAGCGGCAGCAACGGCATGCATCACAAATCGGCAGAGAATCGGAGTCGAGTAGCGTCCTTTGAGGTTGGATCT
ATGTTGTGTATCTGCATTTTCTTGGGATTGTTCTTGTGA
Protein sequenceShow/hide protein sequence
MKWQPKNGNSIFQMAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFEVGS
MLCICIFLGLFL