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IVF0001534 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001534
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptioncentromere protein V-like
Genome locationchr09:12623442..12623840
RNA-Seq ExpressionIVF0001534
SyntenyIVF0001534
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062377.1 centromere protein V isoform X5 [Cucumis melo var. makuwa]2.16e-99100Show/hide
Query:  MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS
        MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS
Subjt:  MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS

Query:  FRCVDPGTLNHVQIIKFDGRNWEQAHHHLSQN
        FRCVDPGTLNHVQIIKFDGRNWEQAHHHLSQN
Subjt:  FRCVDPGTLNHVQIIKFDGRNWEQAHHHLSQN

KAE8648420.1 hypothetical protein Csa_007866 [Cucumis sativus]2.40e-8194.92Show/hide
Query:  MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS
        MG+ND+MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHF LLGDS +FISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS
Subjt:  MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS

Query:  FRCVDPGTLNHVQIIKFD
        FRCVDPGTL+HVQIIKFD
Subjt:  FRCVDPGTLNHVQIIKFD

KAG7032737.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]1.61e-7379.84Show/hide
Query:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR
        ++ KMV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  F LLGDS  F+STYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FR
Subjt:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR

Query:  CVDPGTLNHVQIIKFDGRNWEQAH
        CVDPGTL HV+I KFDG NWE AH
Subjt:  CVDPGTLNHVQIIKFDGRNWEQAH

XP_022946627.1 centromere protein V-like [Cucurbita moschata]1.12e-6871.43Show/hide
Query:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR
        ++ ++VVH+GGCHCK +RW VEA +SV+AWDCNCS+C MR NTHF VP + F LLGDS NFISTYTFGTHTAKHTFCKVCGITSFYH RS PDGV+++F+
Subjt:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR

Query:  CVDPGTLNHVQIIKFDGRNWEQAHHH
        CVDPGTL HV+I +FDG NWE ++ H
Subjt:  CVDPGTLNHVQIIKFDGRNWEQAHHH

XP_038884393.1 centromere protein V [Benincasa hispida]1.73e-6973.39Show/hide
Query:  DKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCV
         ++VVH+GGCHCK++RW+VEA +SV+AWDCNCSNC MR NTHF VP + F LLGDS NFISTYTFG+HTAKHTFCKVCGITSFYH RS PDGV+++F+CV
Subjt:  DKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCV

Query:  DPGTLNHVQIIKFDGRNWEQAHHH
        DPGTL HV+I KFDG NWE ++ H
Subjt:  DPGTLNHVQIIKFDGRNWEQAHHH

TrEMBL top hitse value%identityAlignment
A0A0A0KN47 CENP-V/GFA domain-containing protein4.3e-7193.94Show/hide
Query:  MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS
        MG+ND+MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHF LLGDS +FISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS
Subjt:  MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS

Query:  FRCVDPGTLNHVQIIKFDGRNWEQAHHHLSQN
        FRCVDPGTL+HVQIIKFDG NWEQAHHHL+QN
Subjt:  FRCVDPGTLNHVQIIKFDGRNWEQAHHHLSQN

A0A5A7V607 Centromere protein V isoform X57.5e-76100Show/hide
Query:  MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS
        MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS
Subjt:  MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVS

Query:  FRCVDPGTLNHVQIIKFDGRNWEQAHHHLSQN
        FRCVDPGTLNHVQIIKFDGRNWEQAHHHLSQN
Subjt:  FRCVDPGTLNHVQIIKFDGRNWEQAHHHLSQN

A0A6J1DWG7 centromere protein V isoform X13.4e-5270.63Show/hide
Query:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR
        +  ++VVHSG CHCK++RW V+A + V+AWDCNCSNC MRGNTHF VPS+HF LLGDS  FISTYTFGT TAKHTFCKVCGITSFY  RS PDGV+++F+
Subjt:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR

Query:  CVDPGTLNHVQIIKFDGRNWEQAHHH
        CVDPGTL HV+I +FDG+NWE ++ H
Subjt:  CVDPGTLNHVQIIKFDGRNWEQAHHH

A0A6J1E1M0 centromere protein V isoform X23.4e-5270.63Show/hide
Query:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR
        +  ++VVHSG CHCK++RW V+A + V+AWDCNCSNC MRGNTHF VPS+HF LLGDS  FISTYTFGT TAKHTFCKVCGITSFY  RS PDGV+++F+
Subjt:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR

Query:  CVDPGTLNHVQIIKFDGRNWEQAHHH
        CVDPGTL HV+I +FDG+NWE ++ H
Subjt:  CVDPGTLNHVQIIKFDGRNWEQAHHH

A0A6J1G4E1 centromere protein V-like1.2e-5271.43Show/hide
Query:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR
        ++ ++VVH+GGCHCK +RW VEA +SV+AWDCNCS+C MR NTHF VP + F LLGDS NFISTYTFGTHTAKHTFCKVCGITSFYH RS PDGV+++F+
Subjt:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR

Query:  CVDPGTLNHVQIIKFDGRNWEQAHHH
        CVDPGTL HV+I +FDG NWE ++ H
Subjt:  CVDPGTLNHVQIIKFDGRNWEQAHHH

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 19.0e-1838.94Show/hide
Query:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +V H+GGCHC  +R+ V A + +   DC+C  C  + + HF VP+  FTLL  + + + TY   TH A H+FC  CG+ SF+ + S P    V+  C+D 
Subjt:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVQIIKFDG
        GT+  V I +  G
Subjt:  GTLNHVQIIKFDG

A0A0U1RRI6 Centromere protein V-like protein 39.0e-1838.94Show/hide
Query:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +V H+GGCHC  +R+ V A + +   DC+C  C  + + HF VP+  FTLL  + + + TY   TH A H+FC  CG+ SF+ + S P    V+  C+D 
Subjt:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVQIIKFDG
        GT+  V I +  G
Subjt:  GTLNHVQIIKFDG

P0DPI3 Centromere protein V-like protein 29.0e-1838.94Show/hide
Query:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +V H+GGCHC  +R+ V A + +   DC+C  C  + + HF VP+  FTLL  + + + TY   TH A H+FC  CG+ SF+ + S P    V+  C+D 
Subjt:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVQIIKFDG
        GT+  V I +  G
Subjt:  GTLNHVQIIKFDG

Q7Z7K6 Centromere protein V8.6e-2947.06Show/hide
Query:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +V H+GGCHC  +R+EV A++ +  +DCNCS C  + N HF VP+  F LL  + + I+TYTF TH A+HTFCK CG+ SFY  RS P G  ++  C+D 
Subjt:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVQIIKFDGRNWEQA
        GT+  +   +F+G +WE+A
Subjt:  GTLNHVQIIKFDGRNWEQA

Q9CXS4 Centromere protein V3.9e-2947.9Show/hide
Query:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +V H+GGCHC  +R+EV A++ +  +DCNCS C  + N HF VP+  F LL  + + I+TYTF TH A+HTFCK CG+ SFY  RS P G  ++  C+D 
Subjt:  MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVQIIKFDGRNWEQA
        GT+  V   +F+G +WE+A
Subjt:  GTLNHVQIIKFDGRNWEQA

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases1.2e-4964.52Show/hide
Query:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR
        +  +++ H GGCHC +I+W V+AA SVIAW CNCS+CSMRGN HF VPS +F LL DS +FI+TYTFGTHTAKHTFCKVCGITSFY  RS PDGV+V+ +
Subjt:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR

Query:  CVDPGTLNHVQIIKFDGRNWEQAH
        CV  GTL H+++  +DG+NWE +H
Subjt:  CVDPGTLNHVQIIKFDGRNWEQAH

AT5G16940.2 carbon-sulfur lyases1.2e-4964.52Show/hide
Query:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR
        +  +++ H GGCHC +I+W V+AA SVIAW CNCS+CSMRGN HF VPS +F LL DS +FI+TYTFGTHTAKHTFCKVCGITSFY  RS PDGV+V+ +
Subjt:  LNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFR

Query:  CVDPGTLNHVQIIKFDGRNWEQAH
        CV  GTL H+++  +DG+NWE +H
Subjt:  CVDPGTLNHVQIIKFDGRNWEQAH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTTAATGATAAGATGGTAGTGCACAGTGGTGGATGTCATTGCAAGAGAATAAGATGGGAAGTGGAAGCAGCAAGCAGTGTCATAGCTTGGGATTGCAACTGTTC
AAATTGCTCCATGAGAGGCAATACACATTTCACTGTTCCTTCTAAACATTTTACGCTTTTGGGAGACTCGCACAACTTCATTTCAACCTACACTTTTGGGACTCATACTG
CAAAGCATACCTTTTGTAAAGTTTGTGGGATCACTTCTTTTTACCATTCACGCTCAACTCCAGATGGGGTTTCGGTCAGTTTCAGATGTGTTGATCCTGGCACTTTGAAT
CATGTTCAGATTATCAAGTTTGATGGTAGAAATTGGGAGCAAGCTCATCATCATTTGTCACAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTTAATGATAAGATGGTAGTGCACAGTGGTGGATGTCATTGCAAGAGAATAAGATGGGAAGTGGAAGCAGCAAGCAGTGTCATAGCTTGGGATTGCAACTGTTC
AAATTGCTCCATGAGAGGCAATACACATTTCACTGTTCCTTCTAAACATTTTACGCTTTTGGGAGACTCGCACAACTTCATTTCAACCTACACTTTTGGGACTCATACTG
CAAAGCATACCTTTTGTAAAGTTTGTGGGATCACTTCTTTTTACCATTCACGCTCAACTCCAGATGGGGTTTCGGTCAGTTTCAGATGTGTTGATCCTGGCACTTTGAAT
CATGTTCAGATTATCAAGTTTGATGGTAGAAATTGGGAGCAAGCTCATCATCATTTGTCACAGAACTAG
Protein sequenceShow/hide protein sequence
MGLNDKMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFISTYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLN
HVQIIKFDGRNWEQAHHHLSQN