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IVF0001544 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001544
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr08:6750345..6750584
RNA-Seq ExpressionIVF0001544
SyntenyIVF0001544
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055875.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.12e-3883.54Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M+VFLMSLDMRSWRAIIS WE+ TEKDE  Q VRKSELKWTK+EDDA VGNSR LNALFN V+PNIFKLINTCKSAK A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

KAA0059759.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.11e-3986.08Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M VFLMSLDMRSWRAIIS WE+ TEKDEA QTVRKSELKWTK+EDD  VGNS ALNALFNAVDPNIFKLINTCK AK A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

KAA0065624.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.65e-3781.01Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M+ FLMSL+MRSWRA+IS WE+ TEKDEA QTV+KSELKWTK+EDDA VGNSR LNALFN VDPNIFKLINTCK AK A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

TYK07191.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.06e-3882.28Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M+ FLMSL+MRSWRA+IS WE+ TEKDEA QTVRKSELKWTK+EDDA VGNSR LNALFN V+PNIFKLINTCKSAK A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

TYK21887.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.65e-3783.54Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M+ FLMSL +RSWRA+IS WE+ TEKDE  QTVRKSELKWTK+EDDATVGNSRALNALFN VDPNIFKLINTCKSAK A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

TrEMBL top hitse value%identityAlignment
A0A5D3BKE5 Gag-pol polyprotein1.2e-2886.08Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M VFLMSLDMRSWRAIIS WE+ TEKDEA QTVRKSELKWTK+EDD  VGNS ALNALFNAVDPNIFKLINTCK AK A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

A0A5D3C5K9 Gag-pol polyprotein5.9e-2882.28Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M+ FLMSL+MRSWRA+IS WE+ TEKDEA QTVRKSELKWTK+EDDA VGNSR LNALFN V+PNIFKLINTCKSAK A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

A0A5D3CQ77 Receptor-like protein 129.2e-2983.54Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M  FLMSLDM+SWRA+IS WE+ TEKDEA QTVRKSELKWTK+EDDA VGNSRALNALFN VDPNIFKLINTCKS K A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

A0A5D3D757 Tetracycline resistance protein, class D-like isoform X21.0e-2781.01Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M+ FLMSLDMR WRAIIS WEH TEKDE D+  RK ELKWT EEDDA VGNSR LNALFNA+DPNIFKLINTCKSAK A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

A0A5D3DKM9 Gag-pol polyprotein2.7e-2883.54Show/hide
Query:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA
        M+VFLMSLDMRSWRAIIS WE+ TEKDE  Q VRKSELKWTK+EDDA VGNSR LNALFN V+PNIFKLINTCKSAK A
Subjt:  MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTTTTCTTATGTCACTGGACATGAGGAGTTGGAGAGCAATTATATCTTGTTGGGAACATTCCACTGAAAAGGACGAAGCCGATCAGACTGTTCGAAAATCTGA
GCTGAAATGGACAAAAGAAGAAGATGATGCTACTGTAGGCAACTCTCGTGCACTGAATGCATTGTTCAATGCGGTTGATCCAAACATATTCAAGTTAATCAACACGTGCA
AGTCGGCTAAGACTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTTTTCTTATGTCACTGGACATGAGGAGTTGGAGAGCAATTATATCTTGTTGGGAACATTCCACTGAAAAGGACGAAGCCGATCAGACTGTTCGAAAATCTGA
GCTGAAATGGACAAAAGAAGAAGATGATGCTACTGTAGGCAACTCTCGTGCACTGAATGCATTGTTCAATGCGGTTGATCCAAACATATTCAAGTTAATCAACACGTGCA
AGTCGGCTAAGACTGCTTAG
Protein sequenceShow/hide protein sequence
MDVFLMSLDMRSWRAIISCWEHSTEKDEADQTVRKSELKWTKEEDDATVGNSRALNALFNAVDPNIFKLINTCKSAKTA