CuGenDBv2

Gene ID	IVF0001548
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Vesicle-associated protein 1-3
Genome location	chr10:26426274..26426586
RNA-Seq Expression	IVF0001548
Synteny	IVF0001548
Gene Ontology terms	GO:0061817 - endoplasmic reticulum-plasma membrane tethering (biological process) GO:0090158 - endoplasmic reticulum membrane organization (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008962 - PapD-like superfamily IPR013783 - Immunoglobulin-like fold IPR016763 - Vesicle-associated membrane-protein-associated protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0045467.1 vesicle-associated protein 1-3 [Cucumis melo var. makuwa]

2.92e-44

100

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

TYK14007.1 vesicle-associated protein 1-3 [Cucumis melo var. makuwa]

5.88e-31

83.1

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ PKE P DMQCKDKFLIQSV V PDGTTSK ISAELFN GDGKVV+EFKMRVVYIFANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

XP_004140485.1 vesicle-associated protein 1-3 isoform X1 [Cucumis sativus]

1.18e-30

83.1

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ PKE P DMQCKDKFLIQSV V PDGTTSK ISAELFN GDGKVV+EFKMRVVYIFANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

XP_031742916.1 vesicle-associated protein 1-3 isoform X2 [Cucumis sativus]

6.35e-31

83.1

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ PKE P DMQCKDKFLIQSV V PDGTTSK ISAELFN GDGKVV+EFKMRVVYIFANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

XP_038874796.1 vesicle-associated protein 1-3 [Benincasa hispida]

1.18e-30

83.1

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ PKE P DMQCKDKFLIQSV V PDGTTSK ISAELFN GDGKVV+EFKMRVVYIFANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDW5 MSP domain-containing protein

1.8e-23

83.1

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ PKE P DMQCKDKFLIQSV V PDGTTSK ISAELFN GDGKVV+EFKMRVVYIFANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

A0A1S3C7R5 vesicle-associated protein 1-3

1.8e-23

83.1

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ PKE P DMQCKDKFLIQSV V PDGTTSK ISAELFN GDGKVV+EFKMRVVYIFANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

A0A5A7TUG2 Vesicle-associated protein 1-3

2.7e-32

100

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

A0A5D3CQ04 Vesicle-associated protein 1-3

1.8e-23

83.1

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ PKE P DMQCKDKFLIQSV V PDGTTSK ISAELFN GDGKVV+EFKMRVVYIFANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

A0A6J1KLI0 vesicle-associated protein 1-3-like isoform X1

1.5e-22

81.69

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ PKE P DMQCKDKFLIQSV V PDGTTSK ISAELFN GDGKVV+EFKMRVVY FANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

SwissProt top hits

e value

%identity

Alignment

O82213 Vesicle-associated protein 3-1

9.1e-09

52.63

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYI
        MQ  KEVP DMQ  +KF+IQSV+  P G T+K ++ E+F+   G VVEE K+RV Y+
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYI

Q84WW5 Vesicle-associated protein 1-3

3.0e-20

67.61

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ  KE PLDMQCKDKFL+Q+V VV DGTTSK + AE+FN   G+V+E+FK+RVVYI ANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

Q8VZ95 Vesicle-associated protein 1-1

2.0e-11

51.39

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE
        MQ  KE P DMQCKDKFL+Q VI  P G T+K ++ E+F+   G  VEE K+RV Y+    P  P+ EG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE

Q9SHC8 Vesicle-associated protein 1-2

5.7e-11

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE
        MQ  KE P D+QCKDKFL+Q V+  P G T K ++ E+F+   G  VEE K+RVVY+    P  P+ EG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE

Q9SYC9 Vesicle-associated protein 1-4

4.5e-08

41.67

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE
        MQ  KE P D QCKDK L Q  +V P GT  K +++E+F+   G  VEE   +++Y+    P  P+ EG E+
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE

Arabidopsis top hits

e value

%identity

Alignment

AT2G45140.1 plant VAP homolog 12

4.1e-12

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE
        MQ  KE P D+QCKDKFL+Q V+  P G T K ++ E+F+   G  VEE K+RVVY+    P  P+ EG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE

AT3G60600.1 vesicle associated protein

1.4e-12

51.39

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE
        MQ  KE P DMQCKDKFL+Q VI  P G T+K ++ E+F+   G  VEE K+RV Y+    P  P+ EG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE

AT3G60600.2 vesicle associated protein

1.4e-12

51.39

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE
        MQ  KE P DMQCKDKFL+Q VI  P G T+K ++ E+F+   G  VEE K+RV Y+    P  P+ EG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE

AT3G60600.3 vesicle associated protein

1.4e-12

51.39

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE
        MQ  KE P DMQCKDKFL+Q VI  P G T+K ++ E+F+   G  VEE K+RV Y+    P  P+ EG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIF-ANPLLPIPEGFEE

AT4G00170.1 Plant VAMP (vesicle-associated membrane protein) family protein

2.1e-21

67.61

Show/hide

Query:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE
        MQ  KE PLDMQCKDKFL+Q+V VV DGTTSK + AE+FN   G+V+E+FK+RVVYI ANP  P+PEG EE
Subjt:  MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAAGTTCCTAAGGAGGTGCCTCTTGATATGCAGTGCAAGGATAAGTTCTTAATTCAAAGTGTTATTGTAGTACCCGATGGTACAACATCAAAATACATTAGTGCAGA
ATTGTTTAACAACGGAGATGGTAAGGTAGTTGAAGAGTTTAAGATGAGGGTTGTTTACATTTTTGCAAATCCTCTATTGCCTATCCCAGAAGGATTTGAAGAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MQVPKEVPLDMQCKDKFLIQSVIVVPDGTTSKYISAELFNNGDGKVVEEFKMRVVYIFANPLLPIPEGFEE

IVF0001548 (gene) of Melon (IVF77) v1 genome