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IVF0001555 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001555
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosystem II reaction center protein K
Genome locationchr12:18696875..18697060
RNA-Seq ExpressionIVF0001555
SyntenyIVF0001555
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003687 - Photosystem II PsbK
IPR037270 - Photosystem II PsbK superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_004841766.1 photosystem II protein K [Cucumis melo subsp. melo]5.23e-2795.08Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYSSSFFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
YP_009317369.1 photosystem II protein K [Coccinia grandis]1.50e-2693.44Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSF+GI LN FLYSSSFFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
YP_009325972.1 photosystem II protein K [Citrullus lanatus]1.50e-2693.44Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYSS+FFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
YP_009505063.1 photosystem II protein K [Cucurbita pepo]7.44e-2793.44Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYSSSFFVAKLPEAYAFLNPIVD+M VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
YP_010131077.1 photosystem II protein K [Benincasa hispida]1.50e-2693.44Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYS+SFFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
TrEMBL top hitse value%identityAlignment
A0A1X9Q1R6 Photosystem II reaction center protein K1.7e-1995.08Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYSSSFFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
A0A218KG14 Photosystem II reaction center protein K1.7e-1995.08Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYSSSFFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
A0A249RZF0 Photosystem II reaction center protein K1.7e-1995.08Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYSSSFFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
A0A410HFE4 Photosystem II reaction center protein K1.7e-1995.08Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYSSSFFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
G3ETW8 Photosystem II reaction center protein K1.7e-1995.08Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYSSSFFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
SwissProt top hitse value%identityAlignment
Q06FX8 Photosystem II reaction center protein K8.3e-1985.25Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        M+NI SFI IYL+  LYSSSFF  KLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
Q14FH4 Photosystem II reaction center protein K6.4e-1986.89Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNIL+ I I LNF LYSSSFF  KLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
Q2MIK4 Photosystem II reaction center protein K3.2e-1883.61Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLN  S IGI LN  LYSSSFF  KLPEAYAFLNPIVD+M VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
Q4VZQ0 Photosystem II reaction center protein K4.7e-2295.08Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNILSFIGI LN FLYSSSFFVAKLPEAYAFLNPIVDVM VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
Q8S8Y4 Photosystem II reaction center protein K3.2e-1883.61Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLN  S IGI LN  LYSSSFF  KLPEAYAFLNPIVD+M VIPLFFFLLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
Arabidopsis top hitse value%identityAlignment
ATCG00070.1 photosystem II reaction center protein K precursor1.2e-1778.69Show/hide
Query:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR
        MLNI + I I+ N  L+SS+F VAKLPEAYAFLNPIVDVM VIPLFF LLAFVWQAAVSFR
Subjt:  MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAATATCTTAAGTTTCATCGGTATCTATCTTAATTTTTTCCTTTATTCAAGTAGTTTTTTCGTCGCCAAATTGCCCGAGGCCTACGCTTTTTTGAATCCAATAGT
AGATGTTATGCTAGTAATACCTCTATTCTTTTTTCTATTAGCTTTTGTTTGGCAAGCTGCTGTAAGCTTTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCAATATCTTAAGTTTCATCGGTATCTATCTTAATTTTTTCCTTTATTCAAGTAGTTTTTTCGTCGCCAAATTGCCCGAGGCCTACGCTTTTTTGAATCCAATAGT
AGATGTTATGCTAGTAATACCTCTATTCTTTTTTCTATTAGCTTTTGTTTGGCAAGCTGCTGTAAGCTTTCGATAA
Protein sequenceShow/hide protein sequence
MLNILSFIGIYLNFFLYSSSFFVAKLPEAYAFLNPIVDVMLVIPLFFFLLAFVWQAAVSFR