; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001576 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001576
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein Iojap-related, mitochondrial
Genome locationchr03:26807997..26810620
RNA-Seq ExpressionIVF0001576
SyntenyIVF0001576
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0090071 - negative regulation of ribosome biogenesis (biological process)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR004394 - Protein Iojap/ribosomal silencing factor RsfS
IPR043519 - Nucleotidyltransferase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061023.1 protein Iojap-related [Cucumis melo var. makuwa]4.74e-127100Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
        VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP

XP_008444425.1 PREDICTED: protein Iojap-related, mitochondrial [Cucumis melo]1.12e-12599.46Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIR SSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
        VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP

XP_011649516.1 protein Iojap-related, mitochondrial [Cucumis sativus]1.20e-12094.62Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIR SSAFSSTIRFLQLWNRGV VH HALSSST+ SPDKSLLDL+EVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIY+
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
        +KQKQKGA+QLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKP QKTP
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP

XP_022131306.1 protein Iojap-related, mitochondrial [Momordica charantia]3.90e-10685.33Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML AQRIR SSAFSSTIR LQ WN+G+ VH+H +SSST+SS +  LLDLQEVET+LN VKADDVKVIP+RKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQK
        +KQKQKGA+QL+LPSVEGQE+GKWIVIDSGKVVVHALDENAR+YYNLESLWSTET PDDS+QDLDRALVKIR KNNSKK PAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQK

XP_038884261.1 protein Iojap-related, mitochondrial [Benincasa hispida]4.11e-11090.76Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRI+ SSAFSSTIR LQLWNRGVSVH+HALSSST+SS +K LLDLQEVETILN VKADDVKVI VRK+CDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQK
        VKQKQKGA+QLVLPSVEGQE+GKWIVIDSGKVVVHALDENARSYYNLESLWSTETP DDS+QDLDRA VKIRPKNNSKK PAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQK

TrEMBL top hitse value%identityAlignment
A0A0A0LNG9 Uncharacterized protein1.2e-9294.62Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIR SSAFSSTIRFLQLWNRGV VH HALSSST+ SPDKSLLDL+EVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIY+
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
        +KQKQKGA+QLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKP QKTP
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP

A0A1S3BB26 protein Iojap-related, mitochondrial1.8e-9699.46Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIR SSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
        VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP

A0A5A7UYH0 Protein Iojap-related1.7e-97100Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
        VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP

A0A6J1BP74 protein Iojap-related, mitochondrial1.7e-8185.33Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML AQRIR SSAFSSTIR LQ WN+G+ VH+H +SSST+SS +  LLDLQEVET+LN VKADDVKVIP+RKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQK
        +KQKQKGA+QL+LPSVEGQE+GKWIVIDSGKVVVHALDENAR+YYNLESLWSTET PDDS+QDLDRALVKIR KNNS KKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQK

A0A6J1KB66 protein Iojap-related, mitochondrial4.9e-8187.5Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIR SSA SSTIR LQLWNRGVSV +H LSSST+SS ++ LLDLQEVETILN VKADDV+VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQK
        VKQKQKGA+QLVLPSVEGQE+GKWIVIDSGKVVVHALDE AR+YYNLESLWST+TP DDS+Q+LDRALVKIR KNNS KKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQK

SwissProt top hitse value%identityAlignment
P0AAT6 Ribosomal silencing factor RsfS7.4e-1036.08Show/hide
Query:  LNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWS
        ++ +K  D+  + V+      D M+  TG S+ HV +IA  ++    Q+ + A  L L  VEG+    WIV+D G V+VH + E +R  Y LE LWS
Subjt:  LNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWS

P0AAT7 Ribosomal silencing factor RsfS7.4e-1036.08Show/hide
Query:  LNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWS
        ++ +K  D+  + V+      D M+  TG S+ HV +IA  ++    Q+ + A  L L  VEG+    WIV+D G V+VH + E +R  Y LE LWS
Subjt:  LNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWS

P0AAT8 Ribosomal silencing factor RsfS7.4e-1036.08Show/hide
Query:  LNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWS
        ++ +K  D+  + V+      D M+  TG S+ HV +IA  ++    Q+ + A  L L  VEG+    WIV+D G V+VH + E +R  Y LE LWS
Subjt:  LNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWS

Q02SH2 Ribosomal silencing factor RsfS8.8e-1139.58Show/hide
Query:  LNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLW
        L  +KA D+  + VR      DYMV A G S+  VK++A  ++   K K+ G K L     EG E G+W ++D G VVVH +    R +Y+LE LW
Subjt:  LNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLW

Q9CAF9 Protein Iojap-related, mitochondrial7.9e-4455.43Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML   R R SS   +  +  +L    +   S + SSS   S    +L L EVE IL  VKAD+V VIP    C WAD+ V ATGRS WH++NIAQAL+Y+
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETP-PDDSAQDLDRALVKIRPKNNSKKKPAQ
         KQKQKGAK ++LPSV+G    KWIVID GK VVHALDE AR Y+NLESLWS E+   D S QDL    VK+RPKNNSK+KPA+
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETP-PDDSAQDLDRALVKIRPKNNSKKKPAQ

Arabidopsis top hitse value%identityAlignment
AT1G67620.1 Lojap-related protein5.6e-4555.43Show/hide
Query:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML   R R SS   +  +  +L    +   S + SSS   S    +L L EVE IL  VKAD+V VIP    C WAD+ V ATGRS WH++NIAQAL+Y+
Subjt:  MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETP-PDDSAQDLDRALVKIRPKNNSKKKPAQ
         KQKQKGAK ++LPSV+G    KWIVID GK VVHALDE AR Y+NLESLWS E+   D S QDL    VK+RPKNNSK+KPA+
Subjt:  VKQKQKGAKQLVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETP-PDDSAQDLDRALVKIRPKNNSKKKPAQ

AT3G12930.1 Lojap-related protein1.3e-0427.97Show/hide
Query:  VSVHSHALSSSTSSSPD--KSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQ-KGAKQLVLPSVEGQEEGK
        V   S  + S T+   D  +SL    E+  + + VKA D+KV+ V+    W  + + AT  S   +  I   +    ++K  K A   V P+        
Subjt:  VSVHSHALSSSTSSSPD--KSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQ-KGAKQLVLPSVEGQEEGK

Query:  WIVIDSGKVVVHALDENARSYYNLESLWST----ETPPDDSAQ
        W ++D G VV+H      R++YNLE  +      E P +D +Q
Subjt:  WIVIDSGKVVVHALDENARSYYNLESLWST----ETPPDDSAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCGGCGCAAAGAATTCGATATTCATCTGCTTTCTCTTCCACGATTCGTTTTCTTCAACTATGGAATAGAGGCGTCTCTGTTCACAGCCATGCTCTATCTTCTTC
CACCTCTAGCTCTCCCGACAAAAGCTTACTTGATCTTCAGGAGGTCGAGACGATTCTGAACAAGGTGAAGGCGGACGATGTCAAAGTGATACCAGTCCGTAAAGACTGTG
ATTGGGCTGATTACATGGTGTTCGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATCGCTCAAGCCCTAATTTACAAGGTCAAGCAAAAGCAGAAAGGTGCTAAACAG
TTAGTACTTCCTAGTGTGGAAGGGCAAGAGGAAGGAAAATGGATTGTCATCGACTCTGGTAAAGTAGTAGTTCACGCCCTCGACGAGAATGCCAGGAGTTATTACAATCT
GGAGAGCCTTTGGTCCACTGAGACACCGCCTGATGATTCAGCTCAGGATCTGGACAGAGCTTTAGTGAAGATACGGCCGAAGAACAACTCCAAGAAGAAACCAGCACAAA
AAACCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCGGCGCAAAGAATTCGATATTCATCTGCTTTCTCTTCCACGATTCGTTTTCTTCAACTATGGAATAGAGGCGTCTCTGTTCACAGCCATGCTCTATCTTCTTC
CACCTCTAGCTCTCCCGACAAAAGCTTACTTGATCTTCAGGAGGTCGAGACGATTCTGAACAAGGTGAAGGCGGACGATGTCAAAGTGATACCAGTCCGTAAAGACTGTG
ATTGGGCTGATTACATGGTGTTCGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATCGCTCAAGCCCTAATTTACAAGGTCAAGCAAAAGCAGAAAGGTGCTAAACAG
TTAGTACTTCCTAGTGTGGAAGGGCAAGAGGAAGGAAAATGGATTGTCATCGACTCTGGTAAAGTAGTAGTTCACGCCCTCGACGAGAATGCCAGGAGTTATTACAATCT
GGAGAGCCTTTGGTCCACTGAGACACCGCCTGATGATTCAGCTCAGGATCTGGACAGAGCTTTAGTGAAGATACGGCCGAAGAACAACTCCAAGAAGAAACCAGCACAAA
AAACCCCTTAA
Protein sequenceShow/hide protein sequence
MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVKADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQ
LVLPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVKIRPKNNSKKKPAQKTP