CuGenDBv2

Gene ID	IVF0001590
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Complex1_LYR domain-containing protein
Genome location	chr05:14007491..14007926
RNA-Seq Expression	IVF0001590
Synteny	IVF0001590
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144434.1 uncharacterized protein LOC101204721 [Cucumis sativus]

1.22e-63

92.66

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVKKH+GKEESKKHFVDYVAQK RDKSILSKPH +QQEIKLAR YTFLLNS+HHQKDLLFSYNIAVDRSDEMKR+LGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GLSLPEVYQ
Subjt:  GLSLPEVYQ

XP_022933120.1 uncharacterized protein LOC111439884 [Cucurbita moschata]

6.77e-61

89.91

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVKKHIGKEE+KKHFVDYVAQK R+KS LSKPH VQQ+IKLAR YTFLLNS+HHQKDLLFSYNIA+DRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GL LPEVYQ
Subjt:  GLSLPEVYQ

XP_022967927.1 uncharacterized protein LOC111467294 [Cucurbita maxima]

3.92e-60

88.99

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVK HIGKEE+KKHFVDYVAQK R+KS LSKPH VQQ+IKLAR YTFLLNS+HHQKDLLFSYNIA+DRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GL LPEVYQ
Subjt:  GLSLPEVYQ

XP_023544932.1 uncharacterized protein LOC111804382 [Cucurbita pepo subsp. pepo]

5.35e-58

87.16

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEA QVAK YRQLLKAVK HIGKEE+KKHFVDYVAQK R+ S +SKPH VQQ+IKLAR YTFLLNS+HHQKDLLFSYNIAVDRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GL LPEVYQ
Subjt:  GLSLPEVYQ

XP_038889144.1 uncharacterized protein LOC120079034 [Benincasa hispida]

1.12e-59

89.91

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVK HIGKEESKKHFVDYVAQK RDK+ILSKPH VQQEIKLA  YTFLLNS+HHQKDLLFSYNIAVDRS+EMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GL LPE YQ
Subjt:  GLSLPEVYQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9E2 Uncharacterized protein

1.6e-47

92.66

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVKKH+GKEESKKHFVDYVAQK RDKSILSKPH +QQEIKLAR YTFLLNS+HHQKDLLFSYNIAVDRSDEMKR+LGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GLSLPEVYQ
Subjt:  GLSLPEVYQ

A0A5D3BQE5 Complex1_LYR domain-containing protein

5.9e-42

91.59

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQK RDKSILSKPH VQQEIKLAR YTFLLNS     DLLFSYNIAVDRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEV
        GLSLPE+
Subjt:  GLSLPEV

A0A6J1C0V5 uncharacterized protein LOC111006395

1.6e-39

79.82

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        M+SEALQVA+ YR+LLKAVK HIGKEESKKHFVDYVAQK R++S LS+PH +QQ+IKLA  Y  LLNS+HHQKDLLFSYNIA+DRS+EMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GL LPE YQ
Subjt:  GLSLPEVYQ

A0A6J1EY92 uncharacterized protein LOC111439884

2.0e-45

89.91

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVKKHIGKEE+KKHFVDYVAQK R+KS LSKPH VQQ+IKLAR YTFLLNS+HHQKDLLFSYNIA+DRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GL LPEVYQ
Subjt:  GLSLPEVYQ

A0A6J1HS51 uncharacterized protein LOC111467294

7.4e-45

88.99

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVK HIGKEE+KKHFVDYVAQK R+KS LSKPH VQQ+IKLAR YTFLLNS+HHQKDLLFSYNIA+DRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GL LPEVYQ
Subjt:  GLSLPEVYQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G51960.1 CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 45 Blast hits to 45 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

7.4e-29

58.72

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        M+ E +  A+ YR LLKAV KH+GKE+ K HF+D+V Q+ R  +         ++I LAR+YT+LLNS+H  KDLLFSYNIAVDR++EMKR+L KSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQ
        GL LPEVY+
Subjt:  GLSLPEVYQ

Sequences

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CDS sequence

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ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAGCAAGAAGCATTTTGTGGACTATGTGGC
TCAAAAGTTGAGGGATAAATCCATACTTTCAAAACCCCACTTTGTTCAACAGGAAATCAAACTTGCTCGGCATTACACATTTCTACTTAACAGTATGCACCATCAAAAGG
ACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGCAAGTGTGGGGCTTTCACTTCCTGAGGTTTATCAAACC
TGA

mRNA sequence

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Protein sequence

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MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFVQQEIKLARHYTFLLNSMHHQKDLLFSYNIAVDRSDEMKRILGKSAASVGLSLPEVYQT

IVF0001590 (gene) of Melon (IVF77) v1 genome