; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001625 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001625
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCOPII coat assembly protein SEC16, putative
Genome locationchr08:7272462..7273769
RNA-Seq ExpressionIVF0001625
SyntenyIVF0001625
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07441.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa]7.94e-100100Show/hide
Query:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
        MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
Subjt:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW

Query:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
        AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
Subjt:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL

XP_008462609.1 PREDICTED: uncharacterized protein LOC103500927 [Cucumis melo]3.23e-9999.36Show/hide
Query:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
        MAKSAAQLTYPPPSPSLRRT FLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
Subjt:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW

Query:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
        AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
Subjt:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL

XP_011657724.1 early nodulin-20 [Cucumis sativus]3.06e-9394.9Show/hide
Query:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASA--AAVNSPTAASPANSPYEISIRNRLVKQA
        MAKS+AQLTYPPPSPSLRRT FLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASA  AAVNSPTAASPANSPYEISIRNRLVKQA
Subjt:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASA--AAVNSPTAASPANSPYEISIRNRLVKQA

Query:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC
        AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Subjt:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC

XP_022979075.1 uncharacterized protein LOC111478820 [Cucurbita maxima]1.77e-6778.26Show/hide
Query:  MAKSAAQLTYPPPSPS-----LRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLV
        MAKSAAQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSSQSYTSLKDILPS SA AVNSPTAASPANS YEI IRNRLV
Subjt:  MAKSAAQLTYPPPSPS-----LRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLV

Query:  KQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
        KQAAWAYLQPMSASSYSAGPN FHRF LRFSTGNPI SC GFI   IIP+IIR FR CIC+
Subjt:  KQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL

XP_038883302.1 uncharacterized protein LOC120074291 [Benincasa hispida]1.51e-8085.8Show/hide
Query:  MAKSAAQLTYPPPSPSL---RRTAFLPSSPMPPPN---ADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRL
        MAKSAAQ+TYPPPSPSL   R  AF+PSSPMPPPN   + VSPPPPPSPINL LLSFKSSSQSYTSLKDILPSASAA VNSPTAASPANS YEISIRNRL
Subjt:  MAKSAAQLTYPPPSPSL---RRTAFLPSSPMPPPN---ADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRL

Query:  VKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
        VKQAAWAYLQPMSASSYSAGPNFFHRF LRFST NPIY C GFI  +IIPAIIR FRFCICL
Subjt:  VKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL

TrEMBL top hitse value%identityAlignment
A0A0A0KHJ9 Uncharacterized protein3.5e-7294.9Show/hide
Query:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQA
        MAKS+AQLTYPPPSPSLRRT FLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTSLKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQA
Subjt:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQA

Query:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC
        AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Subjt:  AWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC

A0A1S3CHC6 uncharacterized protein LOC1035009278.0e-7799.36Show/hide
Query:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
        MAKSAAQLTYPPPSPSLRRT FLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
Subjt:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW

Query:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
        AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
Subjt:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL

A0A5A7SL81 Putative COPII coat assembly protein SEC168.0e-7799.36Show/hide
Query:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
        MAKSAAQLTYPPPSPSLRRT FLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
Subjt:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW

Query:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
        AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
Subjt:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL

A0A5D3C6C7 Putative COPII coat assembly protein SEC162.8e-77100Show/hide
Query:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
        MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW
Subjt:  MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAW

Query:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
        AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
Subjt:  AYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL

A0A6J1IS66 uncharacterized protein LOC1114788201.1e-5278.26Show/hide
Query:  MAKSAAQLTYPPPSPS-----LRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLV
        MAKSAAQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSSQSYTSLKDILPS SA AVNSPTAASPANS YEI IRNRLV
Subjt:  MAKSAAQLTYPPPSPS-----LRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLV

Query:  KQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL
        KQAAWAYLQPMSASSYSAGPN FHRF LRFSTGNPI SC GFI   IIP+IIR FR CIC+
Subjt:  KQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52520.1 unknown protein3.5e-0842.11Show/hide
Query:  INLALLSFKSSSQS----YTSLKDILPSASAAAVNSPT---AASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFG
        ++L L+S   SS+     YTSLKDILPS S+  V+SP    A + A S   I+IRNRLVKQAA +YLQP S  + S+ P+F  R          + S F 
Subjt:  INLALLSFKSSSQS----YTSLKDILPSASAAAVNSPT---AASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFG

Query:  FITSSIIPAIIRAF
         + S+   A++R F
Subjt:  FITSSIIPAIIRAF

AT5G06280.1 unknown protein1.6e-0841.27Show/hide
Query:  PSPSLRRTAFLPS-SPMPPPNADVS-PPPPPSPINLALLSFKSSS-QSYTSLKDILPSASAAAVNSPT---AASP--ANSPYEISIRNRLVKQAAWAYLQ
        P+  LRRT  + + + + PP         PPS  +  L+S K SS  +YTSL+DI+ S   +++N P+   + SP  + +  +ISIRNRLVKQAA +YLQ
Subjt:  PSPSLRRTAFLPS-SPMPPPNADVS-PPPPPSPINLALLSFKSSS-QSYTSLKDILPSASAAAVNSPT---AASP--ANSPYEISIRNRLVKQAAWAYLQ

Query:  P--MSASSYSAGPNFFHRFCLRFSTG
        P  +++S  SAG  FF R  L  S G
Subjt:  P--MSASSYSAGPNFFHRFCLRFSTG

AT5G06280.3 unknown protein1.6e-0841.27Show/hide
Query:  PSPSLRRTAFLPS-SPMPPPNADVS-PPPPPSPINLALLSFKSSS-QSYTSLKDILPSASAAAVNSPT---AASP--ANSPYEISIRNRLVKQAAWAYLQ
        P+  LRRT  + + + + PP         PPS  +  L+S K SS  +YTSL+DI+ S   +++N P+   + SP  + +  +ISIRNRLVKQAA +YLQ
Subjt:  PSPSLRRTAFLPS-SPMPPPNADVS-PPPPPSPINLALLSFKSSS-QSYTSLKDILPSASAAAVNSPT---AASP--ANSPYEISIRNRLVKQAAWAYLQ

Query:  P--MSASSYSAGPNFFHRFCLRFSTG
        P  +++S  SAG  FF R  L  S G
Subjt:  P--MSASSYSAGPNFFHRFCLRFSTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAATCCGCCGCCCAATTAACCTATCCACCGCCCTCCCCTTCACTCCGCCGCACAGCCTTCCTTCCCTCCTCCCCCATGCCTCCCCCAAACGCAGACGTTTCTCC
TCCACCACCGCCATCTCCGATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACCTCGCTCAAGGACATCCTTCCCTCTGCCTCCGCCGCCGCCGTCA
ACTCTCCCACTGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCC
TATTCCGCCGGCCCCAATTTCTTCCACCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCACAAGCAGTATCATTCCGGCTATAAT
CCGTGCTTTTCGGTTCTGCATTTGCTTGTGA
mRNA sequenceShow/hide mRNA sequence
CAACGTTTCTCTTTTCCCTTTTCCTCTCTCTCCTTCTCCCCCTCTTTTTAAGCCTTTTCGTAAATTCCATGGCCAAATCCGCCGCCCAATTAACCTATCCACCGCCCTCC
CCTTCACTCCGCCGCACAGCCTTCCTTCCCTCCTCCCCCATGCCTCCCCCAAACGCAGACGTTTCTCCTCCACCACCGCCATCTCCGATTAACTTAGCTCTCCTCTCCTT
CAAATCCTCTTCTCAATCCTACACCTCGCTCAAGGACATCCTTCCCTCTGCCTCCGCCGCCGCCGTCAACTCTCCCACTGCAGCTTCCCCCGCTAACTCCCCCTACGAAA
TCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCACCGTTTCTGCCTCCGT
TTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCACAAGCAGTATCATTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTGTGACGCCGTCGTTT
CCTCGGATTTTGGACTCGCGTATTGACGACGACGACGACGACTTTCTCAGCCTCTGTAATTGACCTAGATCGATTTTGATTCCGCTGTATAAATCTCTTATCATTCCCAA
TTTCATACACAAGTTTGCAATTCAATCCCTAAGGAGAAATGATTTTCCAAATACCATCCAAATAGAAACACAGATTCAATTTCAACATTCGAATAATTTCTCATCAACAA
TATTTCCATTTCGATTTCAATTTCAGTTTCCCTCTGGATTCCATCGATTTTCATTTTTCTTTTGTACAGCCTTTTTCTCACAATTACAAACCTCTCTATGATTGTGGTTT
AATTCGCCTTAATCGAGCTCGACCCGATGGAGGATAAGGAGATGCAGGTTTATCTTCTTCATTAACGGAACTCTCTGTTTCGCCGAAGTCCGGAGATTGACCATCGTCTA
CTTCCTCCATCTCCGAATTTGTTCTTGGAGATTCGTTCATCTGATCGGCGACTCGAGCGGAAAACGACGGCAATTTTTTCGGTGGCAGTGGCGATACCGTCGGCGGTTGG
GGTTGCTGATCGATTCTCTGTAATTAGAAAAAAATTGAAGAATTAGTGATGGGAAATAGCTATGAATGCCATTAATGGCAATGATACTGAAATGAGTGAAGCTTTCTCAA
TAACGATGAATTGTAAATTGTGTTTAATCTGAACGCTTTACATATTGTATTAAATAATTAAATTGTAATTCGACTACAAAAATTAACCATTCCTTTTG
Protein sequenceShow/hide protein sequence
MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASS
YSAGPNFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL