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IVF0001653 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001653
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:11368858..11369100
RNA-Seq ExpressionIVF0001653
SyntenyIVF0001653
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032957.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.80e-4591.14Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR ILACCLLHNLINREMTNFDIED+IDEVDSTHATTAADDIHYIE SNEWTQWRDDLA+EMF DWEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

KAA0035628.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.17e-4688.61Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR IL CCLLHNLINREMTNFDI+D+IDEVDSTHATTAADDIHYIEMSNEW+QWRDDLA+EMFS+WEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.08e-4688.61Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR IL CCLLHNLINR+MTNFDIEDDIDEVDSTHATTAADDIHYIE SNEW++WRDDLA+EMFSDWEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.09e-4589.87Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR ILACCLLHNLINREMTNFDIED+IDEVDSTHATT ADDIHYIE SNEW+QWRDDLA+EMFSDWEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

TYK10899.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.08e-4688.61Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR IL CCLLHNLINR+MTNFDIEDDIDEVDSTHATTAADDIHYIE SNEW++WRDDLA+EMFSDWEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

TrEMBL top hitse value%identityAlignment
A0A5A7SYE7 Putative nuclease HARBI14.3e-3488.61Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR IL CCLLHNLINREMTNFDI+D+IDEVDSTHATTAADDIHYIEMSNEW+QWRDDLA+EMFS+WEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

A0A5A7VLF4 Putative nuclease HARBI15.6e-3488.61Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR IL CCLLHNLINR+MTNFDIEDDIDEVDSTHATTAADDIHYIE SNEW++WRDDLA+EMFSDWEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

A0A5D3BL48 Putative nuclease HARBI13.3e-3489.87Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR ILACCLLHNLINREMTNFDIED+IDEVDSTHATT ADDIHYIE SNEW+QWRDDLA+EMFSDWEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

A0A5D3CKZ1 Putative nuclease HARBI15.6e-3488.61Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR IL CCLLHNLINR+MTNFDIEDDIDEVDSTHATTAADDIHYIE SNEW++WRDDLA+EMFSDWEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

A0A5D3DE97 Putative nuclease HARBI11.9e-3491.14Show/hide
Query:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ
        SYYPV+VQCR ILACCLLHNLINREMTNFDIED+IDEVDSTHATTAADDIHYIE SNEWTQWRDDLA+EMF DWEL NQ
Subjt:  SYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATACTACCCTGTAAAAGTTCAATGTCGCATAATACTCGCATGTTGTCTCCTCCACAACCTTATCAATAGAGAGATGACAAATTTTGATATAGAAGACGACATAGA
TGAGGTTGATTCCACCCACGCGACTACTGCAGCCGATGACATACATTACATAGAGATGTCCAATGAGTGGACTCAGTGGAGGGACGACCTTGCTAAAGAAATGTTTAGTG
ATTGGGAGTTGCCTAACCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATACTACCCTGTAAAAGTTCAATGTCGCATAATACTCGCATGTTGTCTCCTCCACAACCTTATCAATAGAGAGATGACAAATTTTGATATAGAAGACGACATAGA
TGAGGTTGATTCCACCCACGCGACTACTGCAGCCGATGACATACATTACATAGAGATGTCCAATGAGTGGACTCAGTGGAGGGACGACCTTGCTAAAGAAATGTTTAGTG
ATTGGGAGTTGCCTAACCAGTAG
Protein sequenceShow/hide protein sequence
MSYYPVKVQCRIILACCLLHNLINREMTNFDIEDDIDEVDSTHATTAADDIHYIEMSNEWTQWRDDLAKEMFSDWELPNQ