CuGenDBv2

Gene ID	IVF0001673
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	1-deoxy-D-xylulose-5-phosphate synthase
Genome location	chr12:23637279..23639504
RNA-Seq Expression	IVF0001673
Synteny	IVF0001673
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYJ99146.1 uncharacterized protein E5676_scaffold248G003530 [Cucumis melo var. makuwa]

1.22e-171

100

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
        CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFL
        YSMWCASQIYWASPRRPAVGEEADFGVLVFL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFL

XP_004152468.1 uncharacterized protein LOC101221499 isoform X1 [Cucumis sativus]

5.84e-184

95.35

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSGMALTTL+DGRFSPHHTLFY+INAFFGPDIGSFSDWLSSVLGF ASS+PD IHHPVFYILILGLPLCLFYSWLSSFLL KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
         GVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAV VVGFLC CLIGGFVYINRVKSGKSISKQ +QSVKLMVVVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
        YSMWCASQIYWASPRRPAVGEEAD GVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL

XP_008438218.1 PREDICTED: uncharacterized protein LOC103483387 isoform X1 [Cucumis melo]

8.71e-195

100

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
        CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
        YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL

XP_022923863.1 uncharacterized protein LOC111431454 [Cucurbita moschata]

3.20e-172

89.15

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTL Y+INAFFGPDIGSFS+WLSSVLGF  SS+PDAIHHPVFYILILGLPLCLFY+WLSS LLRKGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
         GVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSS YTWILSTGWWENRAPINPDAV VVGFLC CLIGGFVYINRVKS KSI KQ +QSVKL++VVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
        YSMWCASQIYWA+PRRPAVGEEAD GVLVFL  YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL

XP_038893660.1 uncharacterized protein LOC120082528 isoform X1 [Benincasa hispida]

3.63e-178

91.86

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSG ALTTLTDGRFSPHHTL Y++NAFFGPDIGSFSDWLSSVLGF  SS+PDAIHHPVFYILILGLPLCLFYSWLSSFLL+KGLL+SV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
         GVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAV VVGFLC CLIGGFVYINR KS KSISKQ +QSVKL++VVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
        YSMWCASQIYWASPRRPAVGEEAD GVLVFLVFYFFLPHYLCIKSMQPKD E KHLPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LR72 Uncharacterized protein

1.1e-142

95.35

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSGMALTTL+DGRFSPHHTLFY+INAFFGPDIGSFSDWLSSVLGF ASS+PD IHHPVFYILILGLPLCLFYSWLSSFLL KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
         GVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAV VVGFLC CLIGGFVYINRVKSGKSISKQ +QSVKLMVVVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
        YSMWCASQIYWASPRRPAVGEEAD GVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL

A0A1S3AWH9 uncharacterized protein LOC103483387 isoform X1

6.2e-151

100

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
        CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
        YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL

A0A5A7UKW1 Uncharacterized protein

1.3e-132

99.57

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLL KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
        CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFL
        YSMWCASQIYWASPRRPAVGEEADFGVLVFL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFL

A0A5D3BJ72 Uncharacterized protein

3.4e-133

100

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
        CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFL
        YSMWCASQIYWASPRRPAVGEEADFGVLVFL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFL

A0A6J1EAR6 uncharacterized protein LOC111431454

9.0e-134

89.15

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Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTL Y+INAFFGPDIGSFS+WLSSVLGF  SS+PDAIHHPVFYILILGLPLCLFY+WLSS LLRKGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSV

Query:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL
         GVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSS YTWILSTGWWENRAPINPDAV VVGFLC CLIGGFVYINRVKS KSI KQ +QSVKL++VVATL
Subjt:  CGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL
        YSMWCASQIYWA+PRRPAVGEEAD GVLVFL  YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCCGGGACCTGGGCCTCACATGCTCTACGCCATGGGCTCCGGCATGGCTCTGACCACTCTCACCGACGGCCGATTTAGTCCCCACCATACTCTCTTTTACTCCATCAA
CGCTTTCTTCGGTCCCGACATCGGCTCCTTCTCCGATTGGCTGTCCTCCGTTCTTGGTTTCCCAGCATCTTCCCTTCCCGACGCTATCCATCATCCCGTCTTCTACATCC
TCATTCTGGGTCTTCCTCTCTGCCTCTTCTACTCCTGGCTCTCCTCTTTTCTACTCCGTAAGGGCCTCCTCGATTCCGTCTGTGGGGTATCTCTTAATAGAAGGCAATGC
TTGTTGTTAATTTCAGCTGGTTCTTTTTCACACTTCTTTCTTGACCATTTGTTTGAGGAAAACGGGCATTCGTCCACGTACACTTGGATTTTGAGCACTGGTTGGTGGGA
GAACCGAGCACCAATCAATCCAGATGCTGTTTTTGTTGTTGGATTCTTGTGCGCTTGCTTAATTGGTGGTTTTGTTTACATTAACAGAGTGAAGTCTGGAAAGTCGATTT
CGAAACAATGGTTTCAGTCCGTAAAGCTTATGGTAGTAGTAGCTACCCTATATTCCATGTGGTGCGCAAGCCAGATATACTGGGCTAGCCCTCGTCGACCAGCTGTCGGT
GAAGAAGCTGATTTTGGAGTTCTAGTGTTTCTGGTTTTCTATTTTTTTCTACCTCATTATCTTTGTATAAAGTCCATGCAACCAAAAGATTCTGAAACCAAACATCTCCC
ATTGTGA

mRNA sequence

Show/hide mRNA sequence

ATTTAGAAAAATCCAAATAATGGTCGGTTCGTAGTTGTTCGTGGTCGAATCAATTTGAACACAATCCCCGAGTTAGAAGTTCATAATTATATATATCATAAGCTTAAATA
CACAACAATTTCGTCCCTACTTCTTTAATATTTACCGTAAAGAATCTCATCGACTGGCTTACTATCCCTCTCGGCTCGGTCGAGCATCCAGATCGAAACTTGGGTTGCGA
CGGTGATCGTTGAGACGGAACCATGCCGGGACCTGGGCCTCACATGCTCTACGCCATGGGCTCCGGCATGGCTCTGACCACTCTCACCGACGGCCGATTTAGTCCCCACC
ATACTCTCTTTTACTCCATCAACGCTTTCTTCGGTCCCGACATCGGCTCCTTCTCCGATTGGCTGTCCTCCGTTCTTGGTTTCCCAGCATCTTCCCTTCCCGACGCTATC
CATCATCCCGTCTTCTACATCCTCATTCTGGGTCTTCCTCTCTGCCTCTTCTACTCCTGGCTCTCCTCTTTTCTACTCCGTAAGGGCCTCCTCGATTCCGTCTGTGGGGT
ATCTCTTAATAGAAGGCAATGCTTGTTGTTAATTTCAGCTGGTTCTTTTTCACACTTCTTTCTTGACCATTTGTTTGAGGAAAACGGGCATTCGTCCACGTACACTTGGA
TTTTGAGCACTGGTTGGTGGGAGAACCGAGCACCAATCAATCCAGATGCTGTTTTTGTTGTTGGATTCTTGTGCGCTTGCTTAATTGGTGGTTTTGTTTACATTAACAGA
GTGAAGTCTGGAAAGTCGATTTCGAAACAATGGTTTCAGTCCGTAAAGCTTATGGTAGTAGTAGCTACCCTATATTCCATGTGGTGCGCAAGCCAGATATACTGGGCTAG
CCCTCGTCGACCAGCTGTCGGTGAAGAAGCTGATTTTGGAGTTCTAGTGTTTCTGGTTTTCTATTTTTTTCTACCTCATTATCTTTGTATAAAGTCCATGCAACCAAAAG
ATTCTGAAACCAAACATCTCCCATTGTGATAGATGAGTTATTCATTTATATTACAAAACGTTCAATAGACAACATCAGTTTCTCTTTTTCACTTTGACA

Protein sequence

Show/hide protein sequence

MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLFYSINAFFGPDIGSFSDWLSSVLGFPASSLPDAIHHPVFYILILGLPLCLFYSWLSSFLLRKGLLDSVCGVSLNRRQC
LLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVFVVGFLCACLIGGFVYINRVKSGKSISKQWFQSVKLMVVVATLYSMWCASQIYWASPRRPAVG
EEADFGVLVFLVFYFFLPHYLCIKSMQPKDSETKHLPL

IVF0001673 (gene) of Melon (IVF77) v1 genome