; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001695 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001695
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionlight-regulated protein-like
Genome locationchr06:12803842..12805821
RNA-Seq ExpressionIVF0001695
SyntenyIVF0001695
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR009856 - Light regulated Lir1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACV88397.1 GA-like protein, partial [Cucumis sativus]1.96e-7285.61Show/hide
Query:  VLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLE
        VLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ E
Subjt:  VLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLE

Query:  EIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        EIDREYLDYA DSKTVF GEACDDLGGEFCE EFLNGVF
Subjt:  EIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

KAA0066931.1 light-regulated protein isoform X2 [Cucumis melo var. makuwa]3.92e-96100Show/hide
Query:  MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAV
        MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAV
Subjt:  MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAV

Query:  ANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        ANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Subjt:  ANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

XP_004145699.2 light-regulated protein, chloroplastic [Cucumis sativus]1.32e-7285.71Show/hide
Query:  AVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANL
        AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ 
Subjt:  AVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANL

Query:  EEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        EEIDREYLDYA DSKTVF GEACDDLGGEFCE EFLNGVF
Subjt:  EEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

XP_008450019.2 PREDICTED: light-regulated protein isoform X2 [Cucumis melo]5.07e-9499.3Show/hide
Query:  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA
        QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA
Subjt:  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA

Query:  NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Subjt:  NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

XP_016900821.1 PREDICTED: light-regulated protein isoform X3 [Cucumis melo]1.18e-9398.59Show/hide
Query:  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA
        +AAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA
Subjt:  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA

Query:  NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Subjt:  NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

TrEMBL top hitse value%identityAlignment
A0A0A0L8G9 Uncharacterized protein4.6e-5585.71Show/hide
Query:  AVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANL
        AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ 
Subjt:  AVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANL

Query:  EEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        EEIDREYLDY ADSKTVF GEACDDLGGEFCE EFLNGVF
Subjt:  EEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

A0A1S3BND3 light-regulated protein isoform X21.6e-7199.3Show/hide
Query:  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA
        QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA
Subjt:  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA

Query:  NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Subjt:  NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

A0A1S4DXW1 light-regulated protein isoform X33.5e-7198.59Show/hide
Query:  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA
        +AAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA
Subjt:  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVA

Query:  NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Subjt:  NLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

A0A5A7VMP8 Light-regulated protein isoform X26.4e-73100Show/hide
Query:  MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAV
        MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAV
Subjt:  MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAV

Query:  ANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        ANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Subjt:  ANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

C9E9F1 GA-like protein (Fragment)1.3e-5485.61Show/hide
Query:  VLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLE
        VLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ E
Subjt:  VLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLE

Query:  EIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
        EIDREYLDY ADSKTVF GEACDDLGGEFCE EFLNGVF
Subjt:  EIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

SwissProt top hitse value%identityAlignment
Q03200 Light-regulated protein, chloroplastic1.1e-1644.29Show/hide
Query:  MQAAVLS-IAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIK---ATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQ
        MQ A  S + + ++LP++    S     P         RR A++   A A+V  + + VDYSS ISVFP EAC+ IGGEAC    M+PE +L  S     
Subjt:  MQAAVLS-IAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIK---ATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQ

Query:  NPAVANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEA
        + A A  EE+DR+YL Y  +  TVF  EACDDLGGEFC+A
Subjt:  NPAVANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEA

Q96500 Light-regulated protein 1, chloroplastic3.1e-1647.66Show/hide
Query:  LPSSTLSNSSHSHFPFITFGS--NSSRRSAIKATASVVYDTSVVDYSSAI-SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREY
        LPSS  S       P  T  S  +S R +   +++S+  D + VDY+S+I SVFPAEACE I G AC  A+++PEV+L        +  VA+ E +DREY
Subjt:  LPSSTLSNSSHSHFPFITFGS--NSSRRSAIKATASVVYDTSVVDYSSAI-SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREY

Query:  LDYAADSKTVFRGEACDDLGGEFCEAEF
         +Y +  KTVFR EACDDLGGEFCE +F
Subjt:  LDYAADSKTVFRGEACDDLGGEFCEAEF

Arabidopsis top hitse value%identityAlignment
AT3G26740.1 CCR-like2.2e-1747.66Show/hide
Query:  LPSSTLSNSSHSHFPFITFGS--NSSRRSAIKATASVVYDTSVVDYSSAI-SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREY
        LPSS  S       P  T  S  +S R +   +++S+  D + VDY+S+I SVFPAEACE I G AC  A+++PEV+L        +  VA+ E +DREY
Subjt:  LPSSTLSNSSHSHFPFITFGS--NSSRRSAIKATASVVYDTSVVDYSSAI-SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREY

Query:  LDYAADSKTVFRGEACDDLGGEFCEAEF
         +Y +  KTVFR EACDDLGGEFCE +F
Subjt:  LDYAADSKTVFRGEACDDLGGEFCEAEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCCGCTGTTCTTAGCATTGCTGTTCCTTCCCTTCTTCCCAGCTCAACACTTTCCAATAGTAGCCATTCTCATTTCCCTTTCATCACATTTGGTTCTAACTCATC
ACGTCGCTCGGCCATCAAAGCAACCGCCTCGGTCGTCTATGACACGTCTGTAGTTGATTATAGCTCTGCTATCTCGGTGTTTCCAGCAGAAGCATGTGAGACAATAGGTG
GAGAGGCATGTTGTTGGGCAAATATGTTTCCAGAAGTAAGGCTTCAGCCTTCACTTAACAATAATCAAAACCCCGCCGTTGCAAATTTGGAGGAGATTGATAGAGAGTAT
CTTGATTATGCCGCCGATTCAAAGACTGTTTTCCGAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCTGAGTTCCTAAATGGGGTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
CTCCAGTGTATTCTATATAAAGAGTTAATTATAACTTACTTATGCTCATTCAAATCTCAAAACCTTATTTACAACATATCATCAAAATTCAAAATGCAGGCCGCTGTTCT
TAGCATTGCTGTTCCTTCCCTTCTTCCCAGCTCAACACTTTCCAATAGTAGCCATTCTCATTTCCCTTTCATCACATTTGGTTCTAACTCATCACGTCGCTCGGCCATCA
AAGCAACCGCCTCGGTCGTCTATGACACGTCTGTAGTTGATTATAGCTCTGCTATCTCGGTGTTTCCAGCAGAAGCATGTGAGACAATAGGTGGAGAGGCATGTTGTTGG
GCAAATATGTTTCCAGAAGTAAGGCTTCAGCCTTCACTTAACAATAATCAAAACCCCGCCGTTGCAAATTTGGAGGAGATTGATAGAGAGTATCTTGATTATGCCGCCGA
TTCAAAGACTGTTTTCCGAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCTGAGTTCCTAAATGGGGTTTTCTAGTCTTTTTATTTTATAACAAACACAA
AAATAAAATACTAGAGGCTTCTTAGTTGTTGTTTGATTAGCCCCCATATGCCCATATCATAGCTTCTCTAATTGTAACTTTAAGTCTGTAACATCCTTTTCACTATTCTC
TATAAATAATAATGCTTAAATGTTTTAGCTA
Protein sequenceShow/hide protein sequence
MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREY
LDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF