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IVF0001712 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001712
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr05:17632539..17632748
RNA-Seq ExpressionIVF0001712
SyntenyIVF0001712
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050651.1 uncharacterized protein E6C27_scaffold673G001250 [Cucumis melo var. makuwa]2.87e-1488.37Show/hide
Query:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKKDEE
        KA S+REKAQQKHDR FDF EQGGRREGSCERFRVMANK+DEE
Subjt:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKKDEE
TrEMBL top hitse value%identityAlignment
A0A5D3C784 Integrase catalytic domain-containing protein4.4e-1174.55Show/hide
Query:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKKDEEGLIFVNKEDKQK
        KA S+REKAQQKHDR FDF EQGGRREGSCERFRVMANK+DEE      KED+ +
Subjt:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKKDEEGLIFVNKEDKQK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGACGAAATCTTGGAAGGCGACTTCATTGCGAGAGAAGGCTCAGCAGAAACACGACAGAGGATTTGATTTTCGCGAACAAGGAGGACGAAGAGAAGGTTCGTG
CGAGAGATTTAGGGTGATGGCGAACAAGAAAGACGAAGAGGGTTTGATTTTTGTGAACAAGGAGGACAAACAGAAGGTTCGTGCGAGAGATTTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGACGAAATCTTGGAAGGCGACTTCATTGCGAGAGAAGGCTCAGCAGAAACACGACAGAGGATTTGATTTTCGCGAACAAGGAGGACGAAGAGAAGGTTCGTG
CGAGAGATTTAGGGTGATGGCGAACAAGAAAGACGAAGAGGGTTTGATTTTTGTGAACAAGGAGGACAAACAGAAGGTTCGTGCGAGAGATTTAGGGTGA
Protein sequenceShow/hide protein sequence
MGKTKSWKATSLREKAQQKHDRGFDFREQGGRREGSCERFRVMANKKDEEGLIFVNKEDKQKVRARDLG