; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001717 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001717
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr09:6848476..6849183
RNA-Seq ExpressionIVF0001717
SyntenyIVF0001717
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]1.86e-11685.1Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------
        MPPAITLDNILYHWRICTRRNTLSELYL  R LEPCKHVTQ+FTDWWTT+H TYFEDNRH LVSS IPPPSQPRLPKNRGSNLGGKEIRL          
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------

Query:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL
        EVKEHKDESDSSKSDRHWKRPLKKAKVSGD+PD RGLSA  VPDVPPLSPLNDHL+ LIE  SDESLT P+AVDSAFEEVG S+T VNKPTEQSLRPSAL
Subjt:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL

Query:  LEEIRRGK
        LEEIRRGK
Subjt:  LEEIRRGK

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.38e-11084.13Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------
        M PAITLDNILYHWRICTRRNTLSELYL  R LEPCKHVTQ+FTDWWTT+H TYFEDNRH LVSSAIPP SQPRLPKNRGSNLGGKEIRL          
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------

Query:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL
        EVKE KDESDSSKSDRHWKRPLKKAKVSGD+PD RGLSA  VPDVPPLSPLNDHL+ LIE  SDESLT P+AVDSAFEEVG S+T VNKPTEQSLRPSAL
Subjt:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL

Query:  LEEIRRGK
        LEEIRRGK
Subjt:  LEEIRRGK

KAA0048379.1 hypothetical protein E6C27_scaffold264G00980 [Cucumis melo var. makuwa]8.53e-11082.44Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------
        MPPAITLDNILYH RICTR N LSELYL  R LEP KHVTQ+FTDWWTT+H TYFEDNRH LVSSAIPPPSQPRLPKNRGSNLGGKEIRL          
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------

Query:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL
        EVKEHKDESDSSKSDRHWKR LKKAKVS D+PD RGLSA  VPDVPPLSPLNDHL+ LIE  SDESLT P+AVDSAFEEVG SKT VNKPTEQSLRPSAL
Subjt:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL

Query:  LEEIR
        LE+IR
Subjt:  LEEIR

TYK05702.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.04e-11386.87Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRLEVKEHKDESD
        MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPL  +       P L +             EVKEHKDESD
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRLEVKEHKDESD

Query:  SSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSALLEEIRRGK
        SSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSALLEEIRRGK
Subjt:  SSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSALLEEIRRGK

TYK16513.1 hypothetical protein E5676_scaffold21G003220 [Cucumis melo var. makuwa]1.14e-11581.73Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------
        MPPAITL+NILYHWRICTRRNTLS+LYL+ R LEPCKHVTQQFT+WWTTRH TYFEDNRH L+SSAIPPPSQP+LPKNRGSNLGGK+IRL          
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------

Query:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL
        EVKEHKDESDSSKSDRHWKRPLKKAKVS DNPD RGLSA GVPDVPPLSPLN+HL+ LIELGSDE LT P+ VDSAFEEVG SKT VNK  +QSLRPSAL
Subjt:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL

Query:  LEEIRRGK
        L++IRRGK
Subjt:  LEEIRRGK

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein3.6e-9082.69Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------
        MPPAITLDNILYHWRICTRRNTLSELYL  R LEPCKHVTQ+FTDWWTT+H TYFEDNRH LVSSAIPPPSQ RLPKNRG NLGGKEIRL          
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------

Query:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL
        EVKEHKDESDSSKSDRHWKRPLKKA+VSGD+P+ERGLSA  VPDVP +SPLNDHL+ LIE  SDESLT P+AVD AFEEVG SKT VNKP EQSLRPSAL
Subjt:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL

Query:  LEEIRRGK
        LEEIRRGK
Subjt:  LEEIRRGK

A0A5A7SQC9 PMD domain-containing protein7.0e-9485.1Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------
        MPPAITLDNILYHWRICTRRNTLSELYL  R LEPCKHVTQ+FTDWWTT+H TYFEDNRH LVSS IPPPSQPRLPKNRGSNLGGKEIRL          
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------

Query:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL
        EVKEHKDESDSSKSDRHWKRPLKKAKVSGD+PD RGLSA  VPDVPPLSPLNDHL+ LIE  SDESLT P+AVDSAFEEVG S+T VNKPTEQSLRPSAL
Subjt:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL

Query:  LEEIRRGK
        LEEIRRGK
Subjt:  LEEIRRGK

A0A5A7TX42 Uncharacterized protein1.5e-9184.13Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------
        M PAITLDNILYHWRICTRRNTLSELYL  R LEPCKHVTQ+FTDWWTT+H TYFEDNRH LVSSAIPP SQPRLPKNRGSNLGGKEIRL          
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------

Query:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL
        EVKE KDESDSSKSDRHWKRPLKKAKVSGD+PD RGLSA  VPDVPPLSPLNDHL+ LIE  SDESLT P+AVDSAFEEVG S+T VNKPTEQSLRPSAL
Subjt:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL

Query:  LEEIRRGK
        LEEIRRGK
Subjt:  LEEIRRGK

A0A5D3C3B2 Putative mitochondrial protein6.1e-9086.87Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRLEVKEHKDESD
        MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPL   A+ P                  +  EVKEHKDESD
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRLEVKEHKDESD

Query:  SSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSALLEEIRRGK
        SSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSALLEEIRRGK
Subjt:  SSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSALLEEIRRGK

A0A5D3CXA5 Uncharacterized protein2.8e-9081.73Show/hide
Query:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------
        MPPAITL+NILYHWRICTRRNTLS+LYL+ R LEPCKHVTQQFT+WWTTRH TYFEDNRH L+SSAIPPPSQP+LPKNRGSNLGGK+IRL          
Subjt:  MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRL----------

Query:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL
        EVKEHKDESDSSKSDRHWKRPLKKAKVS DNPD RGLSA GVPDVPPLSPLN+HL+ LIELGSDE LT P+ VDSAFEEVG SKT VNK  +QSLRPSAL
Subjt:  EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSAL

Query:  LEEIRRGK
        L++IRRGK
Subjt:  LEEIRRGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCTGCGATCACGCTGGATAATATATTATATCACTGGAGAATATGTACGAGGCGTAACACTTTATCTGAGCTATACTTGTCTGTCCGTAAGTTAGAGCCTTGCAA
GCATGTGACTCAGCAATTTACAGACTGGTGGACCACGAGGCACAGGACCTATTTTGAGGATAACAGACACCCTTTGGTGAGTAGTGCCATTCCTCCCCCTTCACAGCCTA
GACTACCCAAGAACCGAGGAAGCAATCTGGGTGGTAAAGAAATTCGATTGGAGGTAAAGGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGA
CCTTTGAAGAAAGCGAAGGTGTCAGGTGATAATCCCGACGAAAGGGGTTTAAGTGCTTTTGGAGTTCCTGATGTTCCACCACTGTCACCATTGAACGATCATCTTAAAAG
ACTTATAGAGCTAGGCAGTGATGAATCTTTGACGAGACCTTACGCAGTTGATTCGGCCTTTGAGGAAGTTGGCATCTCGAAAACTTCTGTCAATAAACCGACTGAACAAT
CTTTACGCCCATCTGCTCTTCTCGAGGAGATTCGTCGAGGCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACCTGCGATCACGCTGGATAATATATTATATCACTGGAGAATATGTACGAGGCGTAACACTTTATCTGAGCTATACTTGTCTGTCCGTAAGTTAGAGCCTTGCAA
GCATGTGACTCAGCAATTTACAGACTGGTGGACCACGAGGCACAGGACCTATTTTGAGGATAACAGACACCCTTTGGTGAGTAGTGCCATTCCTCCCCCTTCACAGCCTA
GACTACCCAAGAACCGAGGAAGCAATCTGGGTGGTAAAGAAATTCGATTGGAGGTAAAGGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGA
CCTTTGAAGAAAGCGAAGGTGTCAGGTGATAATCCCGACGAAAGGGGTTTAAGTGCTTTTGGAGTTCCTGATGTTCCACCACTGTCACCATTGAACGATCATCTTAAAAG
ACTTATAGAGCTAGGCAGTGATGAATCTTTGACGAGACCTTACGCAGTTGATTCGGCCTTTGAGGAAGTTGGCATCTCGAAAACTTCTGTCAATAAACCGACTGAACAAT
CTTTACGCCCATCTGCTCTTCTCGAGGAGATTCGTCGAGGCAAATGA
Protein sequenceShow/hide protein sequence
MPPAITLDNILYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLVSSAIPPPSQPRLPKNRGSNLGGKEIRLEVKEHKDESDSSKSDRHWKR
PLKKAKVSGDNPDERGLSAFGVPDVPPLSPLNDHLKRLIELGSDESLTRPYAVDSAFEEVGISKTSVNKPTEQSLRPSALLEEIRRGK