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IVF0001719 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001719
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr04:16573056..16573580
RNA-Seq ExpressionIVF0001719
SyntenyIVF0001719
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036711.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]2.40e-3595.71Show/hide
Query:  MVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLV
        MVNTRRGKYQTRST VGFEDVSTKTNMHGVRMRG NSKLPHLDVPTVYRLKEVTYHL ILLRSLLHDDLV
Subjt:  MVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLV

KAA0056755.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]1.77e-3653.09Show/hide
Query:  MVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRL--KEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPL
        MVNTRR KYQ RST +G ED S++TNMH VR+RG   K      P  YRL  K+     S   +  L  D V+S   E+VGH +S+LSDMD ++RD+VPL
Subjt:  MVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRL--KEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPL

Query:  VHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ
         HILKRGVF K +Q D  +P  S+   S     VSLHFTSSSS +DI ASN P HSS N+SQ
Subjt:  VHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ

KAA0060681.1 F5J5.1 [Cucumis melo var. makuwa]2.55e-3046.63Show/hide
Query:  SKMVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPL
        SK VNTRRGKYQ RST VG ED S++ NMHGV              PT               +  L  + V+S   ++VGH +SN+SDMDS+E DDVPL
Subjt:  SKMVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPL

Query:  VHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQG
        +HILK+ VF K +Q D  +P  S    S    SVSLH +SSSS++++ ASN+P HSS N  QG
Subjt:  VHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQG

TYK03313.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.41e-3147.24Show/hide
Query:  SKMVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPL
        S +VNTRRGKYQ RST VG ED S++ NMHGV              PT               +  L  + V+S   ++VGH +SN+SDMDS+E DDVPL
Subjt:  SKMVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPL

Query:  VHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQG
        +HILK+ VF K +Q D  +P  S    S    SVSLHF+SSSS++++ ASN+P HSS N SQG
Subjt:  VHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQG

TYK27718.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.32e-3172.92Show/hide
Query:  LHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPLVHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ
        LH D V S   EHV HQKSN SDMDSD+RDDV L+HILK GVFS KSQP+VSIP PS A H  GV  VSLH TSSS QDDIL+ NV QHSSGNVSQ
Subjt:  LHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPLVHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ

TrEMBL top hitse value%identityAlignment
A0A5A7UQX6 Uncharacterized protein4.6e-2570.83Show/hide
Query:  LHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPLVHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ
        LH D V S   EHV HQ+SN SDMDSD+RDDV L+HILK GVFS KSQP+VSIP PS A H  GV  VSLH TSS  QDDIL+ NV QHSSGNVSQ
Subjt:  LHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPLVHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ

A0A5A7UT97 Cell wall protein RBR3-like4.1e-2951.88Show/hide
Query:  MVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPLVH
        MVNTRR KYQ RST +G ED S++TNMH VR+RG   K      P     K+     S   +  L  D V+S   E+VGH +S+LSDMD ++RD+VPL H
Subjt:  MVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPLVH

Query:  ILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ
        ILKRGVF K +Q D  +P  S+   S     VSLHFTSSSS +DI ASN P HSS N+SQ
Subjt:  ILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ

A0A5D3BUG5 Putative mitochondrial protein1.6e-2547.24Show/hide
Query:  SKMVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPL
        S +VNTRRGKYQ RST VG ED S++ NMHGV              PT               +  L  + V+S   ++VGH +SN+SDMDS+E DDVPL
Subjt:  SKMVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPL

Query:  VHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQG
        +HILK+ VF K +Q D  +P  S    S    SVSLHF+SSSS++++ ASN+P HSS N SQG
Subjt:  VHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQG

A0A5D3BZR7 Cell wall protein RBR3-like6.9e-2995.71Show/hide
Query:  MVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLV
        MVNTRRGKYQTRST VGFEDVSTKTNMHGVRMRG NSKLPHLDVPTVYRLKEVTYHL ILLRSLLHDDLV
Subjt:  MVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLV

A0A5D3DW56 Putative mitochondrial protein3.2e-2672.92Show/hide
Query:  LHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPLVHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ
        LH D V S   EHV HQKSN SDMDSD+RDDV L+HILK GVFS KSQP+VSIP PS A H  GV  VSLH TSSS QDDIL+ NV QHSSGNVSQ
Subjt:  LHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPLVHILKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTTGATTATTGGTTAAGCAAGATGGTGAATACTCGTCGAGGAAAGTATCAAACTCGTTCAACTCCAGTTGGTTTCGAAGATGTTAGCACCAAAACGAACATGCA
TGGTGTTCGAATGAGGGGCACCAATTCAAAACTACCCCATCTCGACGTTCCTACCGTCTACCGTCTGAAAGAAGTTACATACCACCTTTCGATCCTTCTGAGGAGTCTTT
TGCATGATGATCTTGTTAATTCAAATGCTTTCGAGCATGTTGGCCATCAAAAGTCAAACTTATCTGATATGGACTCAGATGAAAGAGATGATGTACCTCTCGTTCATATT
TTGAAGCGTGGGGTTTTTAGCAAAAAATCTCAACCAGATGTTAGTATTCCTGATCCTTCTGCTGCAACTCATTCTTTAGGTGTTTCCTCTGTTTCTCTGCACTTCACGAG
TAGCTCTTCTCAGGATGATATCCTCGCTTCGAATGTGCCACAACACTCAAGTGGAAATGTGTCTCAAGGTTCGAACTTCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTTGATTATTGGTTAAGCAAGATGGTGAATACTCGTCGAGGAAAGTATCAAACTCGTTCAACTCCAGTTGGTTTCGAAGATGTTAGCACCAAAACGAACATGCA
TGGTGTTCGAATGAGGGGCACCAATTCAAAACTACCCCATCTCGACGTTCCTACCGTCTACCGTCTGAAAGAAGTTACATACCACCTTTCGATCCTTCTGAGGAGTCTTT
TGCATGATGATCTTGTTAATTCAAATGCTTTCGAGCATGTTGGCCATCAAAAGTCAAACTTATCTGATATGGACTCAGATGAAAGAGATGATGTACCTCTCGTTCATATT
TTGAAGCGTGGGGTTTTTAGCAAAAAATCTCAACCAGATGTTAGTATTCCTGATCCTTCTGCTGCAACTCATTCTTTAGGTGTTTCCTCTGTTTCTCTGCACTTCACGAG
TAGCTCTTCTCAGGATGATATCCTCGCTTCGAATGTGCCACAACACTCAAGTGGAAATGTGTCTCAAGGTTCGAACTTCAGATAA
Protein sequenceShow/hide protein sequence
MVLDYWLSKMVNTRRGKYQTRSTPVGFEDVSTKTNMHGVRMRGTNSKLPHLDVPTVYRLKEVTYHLSILLRSLLHDDLVNSNAFEHVGHQKSNLSDMDSDERDDVPLVHI
LKRGVFSKKSQPDVSIPDPSAATHSLGVSSVSLHFTSSSSQDDILASNVPQHSSGNVSQGSNFR