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IVF0001774 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001774
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChromo domain-containing protein
Genome locationchr09:17789673..17789954
RNA-Seq ExpressionIVF0001774
SyntenyIVF0001774
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10982.1 extensin-3-like [Cucumis melo var. makuwa]2.72e-1471.19Show/hide
Query:  VAAGRGGGLVTAADGAAKNGGYAKQLVVDRLGLLAADFRRPYGRLRKRLDST-VASDGR
        V AGRGG LVTAADGAA++GGYAK+L+VDRL LLA DFRRPYG LR+RL++  + +DGR
Subjt:  VAAGRGGGLVTAADGAAKNGGYAKQLVVDRLGLLAADFRRPYGRLRKRLDST-VASDGR
TYK21920.1 Chromo domain-containing protein [Cucumis melo var. makuwa]5.81e-1370.18Show/hide
Query:  AGRGGGLVTAADGAAKNGGYAKQLVVDRLGLLAADFRRPYGRLRKRLDSTVASDGRS
        AG+   +VT ADGAAK  GYAK+LVVDRLG LAADFRRPYG L++ LD+ VA DGRS
Subjt:  AGRGGGLVTAADGAAKNGGYAKQLVVDRLGLLAADFRRPYGRLRKRLDSTVASDGRS
TrEMBL top hitse value%identityAlignment
A0A5D3CI60 Extensin-3-like9.2e-1271.19Show/hide
Query:  VAAGRGGGLVTAADGAAKNGGYAKQLVVDRLGLLAADFRRPYGRLRKRLDST-VASDGR
        V AGRGG LVTAADGAA++GGYAK+L+VDRL LLA DFRRPYG LR+RL++  + +DGR
Subjt:  VAAGRGGGLVTAADGAAKNGGYAKQLVVDRLGLLAADFRRPYGRLRKRLDST-VASDGR
A0A5D3DEV2 Chromo domain-containing protein1.7e-1066.13Show/hide
Query:  AGRGGGLVTAADGAAKNGGYAKQLVVDRLGLLAADFRRPYGRLRKRLDSTVASDGRSAVAAR
        AG+   +VT ADGAAK  GYAK+LVVDRLG LAADFRRPYG L++ LD+ VA DGRS    R
Subjt:  AGRGGGLVTAADGAAKNGGYAKQLVVDRLGLLAADFRRPYGRLRKRLDSTVASDGRSAVAAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAAGAAGAGACGCGACTCGACTTCACAACCTCGGTCGACGGCGCTTGGTTTCGACGACCGACGCTCGGTTTCGACGGACGTCGCGGCTGGGCGAGGCGGCGGGCT
CGTAACGGCAGCTGACGGAGCGGCAAAGAATGGTGGCTACGCGAAGCAGCTTGTGGTGGATCGGCTTGGTTTGCTTGCGGCTGACTTCCGACGACCGTACGGCAGGCTTC
GAAAACGGCTCGACAGCACGGTGGCTTCAGACGGACGATCGGCGGTAGCGGCTAGGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGAAGAAGAGACGCGACTCGACTTCACAACCTCGGTCGACGGCGCTTGGTTTCGACGACCGACGCTCGGTTTCGACGGACGTCGCGGCTGGGCGAGGCGGCGGGCT
CGTAACGGCAGCTGACGGAGCGGCAAAGAATGGTGGCTACGCGAAGCAGCTTGTGGTGGATCGGCTTGGTTTGCTTGCGGCTGACTTCCGACGACCGTACGGCAGGCTTC
GAAAACGGCTCGACAGCACGGTGGCTTCAGACGGACGATCGGCGGTAGCGGCTAGGGCTTGA
Protein sequenceShow/hide protein sequence
MRKKRRDSTSQPRSTALGFDDRRSVSTDVAAGRGGGLVTAADGAAKNGGYAKQLVVDRLGLLAADFRRPYGRLRKRLDSTVASDGRSAVAARA