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IVF0001783 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001783
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:16205450..16205905
RNA-Seq ExpressionIVF0001783
SyntenyIVF0001783
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051173.1 retrotransposon protein [Cucumis melo var. makuwa]1.65e-9396.53Show/hide
Query:  KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV
        KGLLNKSF YY+KLAYVF+RDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDV ASRPCQASNNRTEPSGSKQKRGGQHVANV
Subjt:  KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV

Query:  DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN
        DLIHDAMEYANDQLRAM+SGLLSRFIMKLQLAKKSFANFVSYPN
Subjt:  DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN

KAA0055946.1 retrotransposon protein [Cucumis melo var. makuwa]9.80e-4562.9Show/hide
Query:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG
        MQ+HPAAKGLLNK FSYYD+LAYVF RDRAT Q  ETF DI SN+ +GY+GF M D ND+E P +Y+Q   MSQDDVRASRP   S++RT  SGSK+KR 
Subjt:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG

Query:  GQHVANVDLIHDAMEYANDQLRAM
         Q    +++IH A+E ANDQLR +
Subjt:  GQHVANVDLIHDAMEYANDQLRAM

KAA0067019.1 retrotransposon protein [Cucumis melo var. makuwa]2.01e-4664.75Show/hide
Query:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG
        MQTHP AKGLLNKSFSYYD+LAYVF RDR     VETF D+GSNDPS Y+GFQ  D ND E P++Y+Q F+MSQDDVRAS P   S  RT  +GSKQ+R 
Subjt:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG

Query:  GQHVANVDLIHDAMEYANDQLR
        GQ V  +++IH+A+E  NDQLR
Subjt:  GQHVANVDLIHDAMEYANDQLR

TYK03726.1 retrotransposon protein [Cucumis melo var. makuwa]2.46e-97100Show/hide
Query:  KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV
        KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV
Subjt:  KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV

Query:  DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN
        DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN
Subjt:  DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN

TYK08743.1 retrotransposon protein [Cucumis melo var. makuwa]4.26e-4061.48Show/hide
Query:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG
        +++HPAA GLLNKSFSYYD+L YVF RDR T Q  ETF D+GSN+P GY  F M D ND E P +Y+QV N+SQDDVRAS+P +AS  RT  SGSK+KRG
Subjt:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG

Query:  GQHVANVDLIHDAMEYANDQLR
         Q   +V+ IH A++  NDQLR
Subjt:  GQHVANVDLIHDAMEYANDQLR

TrEMBL top hitse value%identityAlignment
A0A5A7U5L6 Retrotransposon protein1.3e-7196.53Show/hide
Query:  KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV
        KGLLNKSF YY+KLAYVF+RDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDV ASRPCQASNNRTEPSGSKQKRGGQHVANV
Subjt:  KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV

Query:  DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN
        DLIHDAMEYANDQLRAM+SGLLSRFIMKLQLAKKSFANFVSYPN
Subjt:  DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN

A0A5A7U9Q0 Vacuolar protein sorting-associated protein 41-like protein1.5e-3261.16Show/hide
Query:  QTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGG
        Q+HPAAKGLLNKSF YYD+L YVF RDRAT +  +TFAD+GSN+P GY GF M D N+ E P+VY+Q  ++SQDDVRASRP + S  RTE SGSK+KRG 
Subjt:  QTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGG

Query:  QHVANVDLIHDAMEYANDQLR
        Q   +V+ IH  ++  N+QLR
Subjt:  QHVANVDLIHDAMEYANDQLR

A0A5D3BZU9 Retrotransposon protein1.2e-74100Show/hide
Query:  KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV
        KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV
Subjt:  KGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANV

Query:  DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN
        DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN
Subjt:  DLIHDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN

A0A5D3DS68 Retrotransposon protein5.1e-3664.75Show/hide
Query:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG
        MQTHP AKGLLNKSFSYYD+LAYVF RDR     VETF D+GSNDPS Y+GFQ  D ND E P++Y+Q F+MSQDDVRAS P   S  RT  +GSKQ+R 
Subjt:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG

Query:  GQHVANVDLIHDAMEYANDQLR
        GQ V  +++IH+A+E  NDQLR
Subjt:  GQHVANVDLIHDAMEYANDQLR

A0A5D3DXB2 Retrotransposon protein1.6e-3462.9Show/hide
Query:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG
        MQ+HPAAKGLLNK FSYYD+LAYVF RDRAT Q  ETF DI SN+ +GY+GF M D ND+E P +Y+Q   MSQDDVRASRP   S++RT  SGSK+KR 
Subjt:  MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRG

Query:  GQHVANVDLIHDAMEYANDQLRAM
         Q    +++IH A+E ANDQLR +
Subjt:  GQHVANVDLIHDAMEYANDQLRAM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACACATCCTGCAGCGAAGGGCCTTCTGAACAAATCATTTTCCTATTACGACAAACTGGCCTATGTGTTCGAGAGAGATAGGGCGACGAGTCAAGGTGTAGAGAC
TTTCGCCGACATTGGGTCTAATGACCCTAGCGGGTACAAGGGATTTCAAATGCTTGATAGAAACGATATAGAGATCCCCACCGTGTACAACCAGGTTTTTAACATGTCCC
AGGATGATGTACGGGCCTCACGACCTTGTCAAGCGTCCAACAATAGGACTGAACCGAGTGGATCAAAGCAAAAGAGGGGAGGACAGCATGTGGCTAATGTTGACCTAATT
CATGATGCGATGGAGTACGCGAATGACCAGCTAAGGGCCATGCAGAGTGGCCTTCTATCGCGCTTCATAATGAAACTGCAGTTGGCCAAGAAGTCCTTCGCTAATTTCGT
GTCATACCCGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACACATCCTGCAGCGAAGGGCCTTCTGAACAAATCATTTTCCTATTACGACAAACTGGCCTATGTGTTCGAGAGAGATAGGGCGACGAGTCAAGGTGTAGAGAC
TTTCGCCGACATTGGGTCTAATGACCCTAGCGGGTACAAGGGATTTCAAATGCTTGATAGAAACGATATAGAGATCCCCACCGTGTACAACCAGGTTTTTAACATGTCCC
AGGATGATGTACGGGCCTCACGACCTTGTCAAGCGTCCAACAATAGGACTGAACCGAGTGGATCAAAGCAAAAGAGGGGAGGACAGCATGTGGCTAATGTTGACCTAATT
CATGATGCGATGGAGTACGCGAATGACCAGCTAAGGGCCATGCAGAGTGGCCTTCTATCGCGCTTCATAATGAAACTGCAGTTGGCCAAGAAGTCCTTCGCTAATTTCGT
GTCATACCCGAACTAA
Protein sequenceShow/hide protein sequence
MQTHPAAKGLLNKSFSYYDKLAYVFERDRATSQGVETFADIGSNDPSGYKGFQMLDRNDIEIPTVYNQVFNMSQDDVRASRPCQASNNRTEPSGSKQKRGGQHVANVDLI
HDAMEYANDQLRAMQSGLLSRFIMKLQLAKKSFANFVSYPN