; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001785 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001785
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L38
Genome locationchr05:12681500..12692142
RNA-Seq ExpressionIVF0001785
SyntenyIVF0001785
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsIPR002675 - Ribosomal protein L38e
IPR038464 - Ribosomal protein L38e superfamily
IPR038765 - Papain-like cysteine peptidase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053554.1 uncharacterized protein E6C27_scaffold190G001200 [Cucumis melo var. makuwa]4.20e-5292Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKVGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE
        VIINPYDDVVYHL+SLRTSSRDDIKYV NMALTIFQSQKNLKKTRKTTFW  + VGTVECGYYVMRYMREIVSKDTSIITD+IDTRNSYSQLEL+EVRVE
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKVGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE

KAA0058950.1 uncharacterized protein E6C27_scaffold98G001330 [Cucumis melo var. makuwa]1.11e-5493.27Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE
        VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKT+KTTFWKAVK    VGTVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+E
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE

Query:  VRVE
        VRVE
Subjt:  VRVE

TYK01269.1 transposase [Cucumis melo var. makuwa]9.76e-5294.23Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE
        VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VGTVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+E
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE

Query:  VRVE
        VRVE
Subjt:  VRVE

TYK13910.1 uncharacterized protein E5676_scaffold832G001070 [Cucumis melo var. makuwa]3.02e-5292Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKVGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE
        VIINPYDDVVYHLDSLRTSSRDDIKYVTNMAL IFQSQKNLKKTRKTTFWKAVK     CGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+EVRVE
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKVGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVRVE

TYK20612.1 uncharacterized protein E5676_scaffold132G00390 [Cucumis melo var. makuwa]1.63e-5291.18Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKA--VKVGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVR
        VIINPYDDVVYHL+S RTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWK   +KVGTVECGYYVMRYMREI+SK+TSIITDAIDTRNSYSQLEL+EVR
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKA--VKVGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNEVR

Query:  VE
        VE
Subjt:  VE

TrEMBL top hitse value%identityAlignment
A0A5A7SLX6 Transposase1.4e-4494.23Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE
        VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VGTVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+E
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE

Query:  VRVE
        VRVE
Subjt:  VRVE

A0A5A7TSY7 ULP_PROTEASE domain-containing protein3.1e-4493.27Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE
        VIINPYDD+VYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VGTVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+E
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE

Query:  VRVE
        VRVE
Subjt:  VRVE

A0A5A7ULI5 ULP_PROTEASE domain-containing protein1.4e-4494.23Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE
        VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VGTVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+E
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE

Query:  VRVE
        VRVE
Subjt:  VRVE

A0A5A7UV64 ULP_PROTEASE domain-containing protein3.1e-4493.27Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE
        VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKT+KTTFWKAVK    VGTVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+E
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE

Query:  VRVE
        VRVE
Subjt:  VRVE

A0A5D3BT71 Transposase1.4e-4494.23Show/hide
Query:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE
        VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK    VGTVECGYYVMRYMREI+SKDTSIITDAIDTRNSYSQLEL+E
Subjt:  VIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVK----VGTVECGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELNE

Query:  VRVE
        VRVE
Subjt:  VRVE

SwissProt top hitse value%identityAlignment
O22860 60S ribosomal protein L388.8e-2889.71Show/hide
Query:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD
        MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLPP ++ QD
Subjt:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD

P46291 60S ribosomal protein L381.1e-2585.29Show/hide
Query:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD
        MPKQIHEIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKADKLKQSLPP ++ QD
Subjt:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD

Q32PB9 60S ribosomal protein L381.4e-2072.06Show/hide
Query:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD
        MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLPP +  ++
Subjt:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD

Q95V84 60S ribosomal protein L388.5e-2377.94Show/hide
Query:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD
        MPKQIHEIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKADKLKQSLPP +  ++
Subjt:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD

Q9JJI8 60S ribosomal protein L384.7e-2173.53Show/hide
Query:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD
        MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLPP +  +D
Subjt:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD

Arabidopsis top hitse value%identityAlignment
AT2G43460.1 Ribosomal L38e protein family6.3e-2989.71Show/hide
Query:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD
        MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLPP ++ QD
Subjt:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD

AT3G59540.1 Ribosomal L38e protein family6.3e-2989.71Show/hide
Query:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD
        MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLPP ++ QD
Subjt:  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAGCAAATCCATGAGATCAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGCTCTGTCAAAATCAAAAGGAGCAAAGATGTAGTCAAGTTTAAGGTTCG
CTGTTCCAAGTACCTTTACACGCTCTGCGTCTTTGACTCGGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCACCAGCCGTGACTGCCCAAGACGCCAACGACCGCCGTG
AAGTCCGATGCCGCCGGAAGACCCATTCGACGCTCGAGTCCCATGCCGCTGAAAACCCACGCTGCGCGAAAACCCCCGCCGTGCGAAGAACCCCGCCGCCGAAGACCACG
TCACCGAAGACCTACACCGTCGAAGACCCACGCCGCGCGAACACCTCATTTGCGCGAAGACCCGCGCCGATGACCTGCGTCCCGTTTTCAACCCTTCGTTATCTTGCAGC
AACTTTTCGATCACCAATCAACAAGGTTCCGAGCCTTTTCGGTAAGAGTCGGGGGCATTGGGAAGCGTGGGAGACTATTCATCATCTCCCCCAACCGTCGCCGCCGCCCT
ACTCCAACCGTCGCCGTCGAACGACCATCGCAGGCCAACTTGAGCCGATAACCACTCTTCCAGCCGCGTCGGAGAGCCGTCCAAGCCGAGCCGCCGTGCGTCGAGTGTCA
TCCGCAAGCATCACGCGCCCGCGTCTTCTCCGCTGTAATCCGCCTTTCCACCGTCGACCACCAGCCAACGCCGCGTCGTCGAAGGTCCGTGTCCAGCGTCTCACCCGCCG
CCCGAACTGGATCCGACCCACACGCCGCGTCGTGTTATCGTGTAAAGCCGCCGCCCCCGCGCCGCTCGCACGCTCCGCGCGCCGCTCGCCCGATCGCCAGCCGCGCGACT
TTCGCCGCTTGGGGGAGCGTGTTGTTACTGCTAGGACTTGTCGAGTAATCTCCGGCCCGAACATCTTAGGTATTCCCTTAGGAATTACCATGGACCAGCTTGTCCCTATG
GGGGCACATGGTGCACGTGTTCGGGGACGTGCTAGTTCAGGGGCAGAGGCAGAGGTAGGAACAAGGGCAAGCTGGCGAGTGACCAGAAGTGATCGTGTAATTATTAATCC
ATATGATGATGTGGTGTACCATCTTGATTCCTTGAGAACAAGCTCCCGAGATGATATTAAATACGTAACGAATATGGCCCTGACGATTTTCCAATCTCAGAAGAATTTGA
AAAAGACTAGAAAAACAACATTCTGGAAAGCGGTAAAGGTAGGAACTGTTGAATGTGGATATTATGTCATGAGATACATGCGCGAAATCGTGAGTAAGGACACAAGCATT
ATTACTGATGCGATTGATACAAGAAACTCGTACTCACAGCTTGAATTGAATGAAGTACGAGTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAGCAAATCCATGAGATCAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGCTCTGTCAAAATCAAAAGGAGCAAAGATGTAGTCAAGTTTAAGGTTCG
CTGTTCCAAGTACCTTTACACGCTCTGCGTCTTTGACTCGGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCACCAGCCGTGACTGCCCAAGACGCCAACGACCGCCGTG
AAGTCCGATGCCGCCGGAAGACCCATTCGACGCTCGAGTCCCATGCCGCTGAAAACCCACGCTGCGCGAAAACCCCCGCCGTGCGAAGAACCCCGCCGCCGAAGACCACG
TCACCGAAGACCTACACCGTCGAAGACCCACGCCGCGCGAACACCTCATTTGCGCGAAGACCCGCGCCGATGACCTGCGTCCCGTTTTCAACCCTTCGTTATCTTGCAGC
AACTTTTCGATCACCAATCAACAAGGTTCCGAGCCTTTTCGGTAAGAGTCGGGGGCATTGGGAAGCGTGGGAGACTATTCATCATCTCCCCCAACCGTCGCCGCCGCCCT
ACTCCAACCGTCGCCGTCGAACGACCATCGCAGGCCAACTTGAGCCGATAACCACTCTTCCAGCCGCGTCGGAGAGCCGTCCAAGCCGAGCCGCCGTGCGTCGAGTGTCA
TCCGCAAGCATCACGCGCCCGCGTCTTCTCCGCTGTAATCCGCCTTTCCACCGTCGACCACCAGCCAACGCCGCGTCGTCGAAGGTCCGTGTCCAGCGTCTCACCCGCCG
CCCGAACTGGATCCGACCCACACGCCGCGTCGTGTTATCGTGTAAAGCCGCCGCCCCCGCGCCGCTCGCACGCTCCGCGCGCCGCTCGCCCGATCGCCAGCCGCGCGACT
TTCGCCGCTTGGGGGAGCGTGTTGTTACTGCTAGGACTTGTCGAGTAATCTCCGGCCCGAACATCTTAGGTATTCCCTTAGGAATTACCATGGACCAGCTTGTCCCTATG
GGGGCACATGGTGCACGTGTTCGGGGACGTGCTAGTTCAGGGGCAGAGGCAGAGGTAGGAACAAGGGCAAGCTGGCGAGTGACCAGAAGTGATCGTGTAATTATTAATCC
ATATGATGATGTGGTGTACCATCTTGATTCCTTGAGAACAAGCTCCCGAGATGATATTAAATACGTAACGAATATGGCCCTGACGATTTTCCAATCTCAGAAGAATTTGA
AAAAGACTAGAAAAACAACATTCTGGAAAGCGGTAAAGGTAGGAACTGTTGAATGTGGATATTATGTCATGAGATACATGCGCGAAATCGTGAGTAAGGACACAAGCATT
ATTACTGATGCGATTGATACAAGAAACTCGTACTCACAGCTTGAATTGAATGAAGTACGAGTGGAGTGA
Protein sequenceShow/hide protein sequence
MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPAVTAQDANDRREVRCRRKTHSTLESHAAENPRCAKTPAVRRTPPPKTT
SPKTYTVEDPRRANTSFARRPAPMTCVPFSTLRYLAATFRSPINKVPSLFGKSRGHWEAWETIHHLPQPSPPPYSNRRRRTTIAGQLEPITTLPAASESRPSRAAVRRVS
SASITRPRLLRCNPPFHRRPPANAASSKVRVQRLTRRPNWIRPTRRVVLSCKAAAPAPLARSARRSPDRQPRDFRRLGERVVTARTCRVISGPNILGIPLGITMDQLVPM
GAHGARVRGRASSGAEAEVGTRASWRVTRSDRVIINPYDDVVYHLDSLRTSSRDDIKYVTNMALTIFQSQKNLKKTRKTTFWKAVKVGTVECGYYVMRYMREIVSKDTSI
ITDAIDTRNSYSQLELNEVRVE