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IVF0001860 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001860
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L33-like
Genome locationchr06:2498300..2499735
RNA-Seq ExpressionIVF0001860
SyntenyIVF0001860
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR018264 - Ribosomal protein L33, conserved site
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058825.1 50S ribosomal protein L33-like [Cucumis melo var. makuwa]2.83e-104100Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK

KAE8650541.1 hypothetical protein Csa_009952 [Cucumis sativus]3.85e-9391.25Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KGLL QRALERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK

XP_008456021.1 PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo]1.42e-104100Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK

XP_031739425.1 uncharacterized protein LOC105434866 [Cucumis sativus]2.73e-8984.39Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKG-------------LLPQRALERSIRYGSVICMAKRYAPDTTK
        M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KG             LL QRALERSIRY SVICMAKRYAP+TTK
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKG-------------LLPQRALERSIRYGSVICMAKRYAPDTTK

Query:  RKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        RKRLSRKRGGDPAKKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Subjt:  RKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK

XP_038880588.1 uncharacterized protein LOC120072240 [Benincasa hispida]2.11e-8384.38Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDL +SCGKRN+FLS+S+SSA  N +TFNS SF A LSL  S VPN+KG L QRA ERSIRY SVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGG+KDFKIVRLSSTARTGFFYAKKKSRKMADK+E++KYDPIANRHVLF EVK
Subjt:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK

TrEMBL top hitse value%identityAlignment
A0A0A0LAF8 Uncharacterized protein2.4e-6884.39Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKG-------------LLPQRALERSIRYGSVICMAKRYAPDTTK
        M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KG             LL QRALERSIRY SVICMAKRYAP+TTK
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKG-------------LLPQRALERSIRYGSVICMAKRYAPDTTK

Query:  RKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        RKRLSRKRGGDPAKKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Subjt:  RKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK

A0A1S3C284 uncharacterized protein LOC1034960737.9e-80100Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK

A0A5A7UZ21 50S ribosomal protein L33-like7.9e-80100Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK

A0A6J1E445 uncharacterized protein LOC111430611 isoform X15.2e-5575.47Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MA TI+R CLD  LSCG+RN+FL +S+SS P +F++F   SF A LS  LS VPNVK  L Q A ERSIR+GSVICMA+RYAP+ TKRKRLSRKRGGDP 
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEV
        KKKKTRRKGGRKDFKI+RLSSTA TGFFYAKKKSRKMADKIE+QK+DP+A RHVLFTEV
Subjt:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEV

A0A6J1E4T6 uncharacterized protein LOC111430611 isoform X21.4e-5575.62Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MA TI+R CLD  LSCG+RN+FL +S+SS P +F++F   SF A LS  LS VPNVK  L Q A ERSIR+GSVICMA+RYAP+ TKRKRLSRKRGGDP 
Subjt:  MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGGRKDFKI+RLSSTA TGFFYAKKKSRKMADKIE+QK+DP+A RHVLFTEVK
Subjt:  KKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK

SwissProt top hitse value%identityAlignment
B6IN38 50S ribosomal protein L333.9e-0754.35Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK
        +++L S+A TGFFY KKK+ RK  +K+E +KYDP+A +HV+F E K
Subjt:  IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK

Q2W1A2 50S ribosomal protein L331.9e-0654.35Show/hide
Query:  IVRLSSTARTGFFY-AKKKSRKMADKIEVQKYDPIANRHVLFTEVK
        +++L STA TGFFY AKK  RK  +K+E +KYDP+  +HV F E K
Subjt:  IVRLSSTARTGFFY-AKKKSRKMADKIEVQKYDPIANRHVLFTEVK

Q3YSN4 50S ribosomal protein L338.6e-0750Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK
        +V+L+S+A+TGFFY KK++ +K+ +K+  +KYDP+  +HVLF+E K
Subjt:  IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK

Q5FFJ4 50S ribosomal protein L336.6e-0752.17Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK
        +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Subjt:  IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK

Q5HBV6 50S ribosomal protein L336.6e-0752.17Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK
        +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Subjt:  IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK

Arabidopsis top hitse value%identityAlignment
AT3G06320.1 Ribosomal protein L33 family protein1.9e-0958.82Show/hide
Query:  RKDFKIVRLSSTARTGFFYAKKKSRK-MADKIEVQKYDPIANRHVLFTEVK
        +K F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Subjt:  RKDFKIVRLSSTARTGFFYAKKKSRK-MADKIEVQKYDPIANRHVLFTEVK

AT5G18790.1 Ribosomal protein L33 family protein1.9e-0958.82Show/hide
Query:  RKDFKIVRLSSTARTGFFYAKKKSRK-MADKIEVQKYDPIANRHVLFTEVK
        +K F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Subjt:  RKDFKIVRLSSTARTGFFYAKKKSRK-MADKIEVQKYDPIANRHVLFTEVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGACGCTTTCTTGTGGAAAAAGGAATCAATTTCTCAGTAATTCTTCCTCTTCAGCTCCTTCAAACTTCATCACCTT
CAACTCTCCCTCCTTCCCTGCTACCCTCTCGCTCACGCTCAGCTTCGTTCCCAATGTCAAAGGATTGCTGCCACAGAGGGCTCTGGAAAGATCAATTCGCTATGGATCCG
TAATTTGCATGGCCAAAAGATATGCTCCTGACACTACAAAGAGAAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGCCAAGAAAAAGAAGACAAGGAGGAAAGGGGGA
AGGAAAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGGTCCAGAAATATGA
CCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
GTTCATTTTCATGGAAGAAGATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGACGCTTTCTTGTGGAAAAAGGAATCAATTTCTCAGTAATTCTTCCTCTTCAGCT
CCTTCAAACTTCATCACCTTCAACTCTCCCTCCTTCCCTGCTACCCTCTCGCTCACGCTCAGCTTCGTTCCCAATGTCAAAGGATTGCTGCCACAGAGGGCTCTGGAAAG
ATCAATTCGCTATGGATCCGTAATTTGCATGGCCAAAAGATATGCTCCTGACACTACAAAGAGAAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGCCAAGAAAAAGA
AGACAAGGAGGAAAGGGGGAAGGAAAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAG
ATTGAGGTCCAGAAATATGACCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGAGTCAGATTGTTCTCTGTGATGGATATATACAAAAGATAGATAGATAG
CTGGATGGATAGATGGATAGGTAAAACTTTGTTGTTATTAAGGATGCTTACTGGTTTCATGAAACCACTGCTTGCTTCACATTTTGAATTCAAAGCTGAAAGTTAGGAAA
TATATTATTGAATGCCGAGTACGTTGCCATGACCGACCTTATTTGAATAAGATTTGTTCTAT
Protein sequenceShow/hide protein sequence
MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGG
RKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK