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IVF0001996 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001996
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr03:10891286..10891513
RNA-Seq ExpressionIVF0001996
SyntenyIVF0001996
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043083.1 uncharacterized protein E6C27_scaffold158G00210 [Cucumis melo var. makuwa]6.79e-2781.33Show/hide
Query:  MRVIQTQIHQEVEEDNIIRGD----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
        ++VIQTQIHQEVEEDNIIRG           MTKDRLNVIIVINSAI+LGNAEIELKKMQIMLRKMKKAVIPHCF
Subjt:  MRVIQTQIHQEVEEDNIIRGD----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF

KAA0058597.1 retrotransposon protein [Cucumis melo var. makuwa]6.50e-1775.86Show/hide
Query:  IHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
        I  +VE+D I+ G MTKD LNVIIVIN AIILGNAEIE KKMQ ML+ MKKAVIPHCF
Subjt:  IHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF

TYJ96705.1 UBN2 domain-containing protein [Cucumis melo var. makuwa]9.68e-0484.62Show/hide
Query:  GNAEIELKKMQIMLRKMKKAVIPHCF
         + EIELKKMQIMLRKMKK VIPHCF
Subjt:  GNAEIELKKMQIMLRKMKKAVIPHCF

XP_031737535.1 uncharacterized protein LOC105435097 [Cucumis sativus]1.59e-0894.44Show/hide
Query:  TKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKK
        TKDRLNVIIVIN AII GNAEIELKKMQIMLRKMKK
Subjt:  TKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKK

TrEMBL top hitse value%identityAlignment
A0A5A7TIB1 Uncharacterized protein1.2e-2181.33Show/hide
Query:  MRVIQTQIHQEVEEDNIIRGD----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
        ++VIQTQIHQEVEEDNIIRG           MTKDRLNVIIVINSAI+LGNAEIELKKMQIMLRKMKKAVIPHCF
Subjt:  MRVIQTQIHQEVEEDNIIRGD----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF

A0A5A7UV40 Retrotransposon protein9.9e-1375.86Show/hide
Query:  IHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
        I  +VE+D I+ G MTKD LNVIIVIN AIILGNAEIE KKMQ ML+ MKKAVIPHCF
Subjt:  IHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCAT
TATTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCAT
TATTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAG
Protein sequenceShow/hide protein sequence
MRVIQTQIHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF