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IVF0001998 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001998
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2
Genome locationtig00001945:135906..137935
RNA-Seq ExpressionIVF0001998
SyntenyIVF0001998
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147214.1 uncharacterized protein LOC101221008 isoform X2 [Cucumis sativus]6.86e-2462Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPN----PLLRL-----SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASACQ + A  ++  S  + VR         S   LP+    P +R      SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPN----PLLRL-----SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

XP_008448836.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis melo]4.83e-2462Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPN----PLLRL-----SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASACQ + A  ++  S  + VR         S   LP+    P +R      SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPN----PLLRL-----SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

XP_022154047.1 uncharacterized protein LOC111021400 isoform X2 [Momordica charantia]6.86e-2461Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPN----PLLRL-----SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASAC  + A  ++  S  ++VR   P     S   LP+    P +R      SPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPN----PLLRL-----SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

XP_023005612.1 uncharacterized protein LOC111498548 isoform X1 [Cucurbita maxima]2.40e-2461Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNPL---------LRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASACQ + A  L+  S  + +R   P     S   LP+           L  SPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNPL---------LRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

XP_023538758.1 uncharacterized protein LOC111799595 isoform X1 [Cucurbita pepo subsp. pepo]9.73e-2460Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNPL---------LRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASAC+ + A  ++  S  + +R   P     SS  LP            L  SPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNPL---------LRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

TrEMBL top hitse value%identityAlignment
A0A1S3BL94 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X25.4e-1761Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASACQ + A  ++  S  + VR         S   LP+           L  SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

A0A6J1DKL6 uncharacterized protein LOC111021400 isoform X27.1e-1760Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASAC  + A  ++  S  ++VR   P     S   LP+           L  SPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

A0A6J1FBC3 uncharacterized protein LOC111444048 isoform X11.6e-1660Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASAC+ + A  ++  S  + +R   P     SS  LP            L  SPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

A0A6J1HQE3 uncharacterized protein LOC111465140 isoform X24.6e-1660Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLP----NPLLRL-----SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASAC+ + A  ++  S  + VR   P     S   LP     P +R      +PSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLP----NPLLRL-----SPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

A0A6J1KTL9 uncharacterized protein LOC111498548 isoform X13.2e-1761Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASACQ + A  L+  S  + +R   P     S   LP+           L  SPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G17310.2 unknown protein5.6e-1453.06Show/hide
Query:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSS--LYLPNPLLR-----LSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        MASAC++L     +  S  S++R    +    SS    LP+   R       PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQELGLSVPR
Subjt:  MASACQELRAESLNPHSEHSSVRILPPNLHLLSS--LYLPNPLLR-----LSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

AT5G47455.2 unknown protein3.7e-1066Show/hide
Query:  NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQE
        +PL R S    PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+Q+
Subjt:  NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQE

AT5G47455.3 unknown protein3.3e-1470.18Show/hide
Query:  NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
        +PL R S    PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QE+GLSVPR
Subjt:  NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

AT5G47455.4 unknown protein3.7e-1066Show/hide
Query:  NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQE
        +PL R S    PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+Q+
Subjt:  NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQE

AT5G47455.5 unknown protein3.7e-1066Show/hide
Query:  NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQE
        +PL R S    PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+Q+
Subjt:  NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTTGCCAAGAATTGCGAGCAGAATCTCTCAATCCTCATTCCGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCAGTTCCCTCTACCT
TCCAAATCCACTGCTCCGTCTGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACGA
ATTCGAGGAGTTGTCGTGCGCTTTCTCAGGAGTTAGGTTTATCCGTTCCAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGCTTGCCAAGAATTGCGAGCAGAATCTCTCAATCCTCATTCCGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCAGTTCCCTCTACCT
TCCAAATCCACTGCTCCGTCTGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACGA
ATTCGAGGAGTTGTCGTGCGCTTTCTCAGGAGTTAGGTTTATCCGTTCCAAGGTGA
Protein sequenceShow/hide protein sequence
MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNPLLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR