; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002002 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002002
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA exonuclease 4
Genome locationchr09:3495255..3499867
RNA-Seq ExpressionIVF0002002
SyntenyIVF0002002
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013087 - Zinc finger C2H2-type
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656270.1 RNA exonuclease 4 [Cucumis sativus]1.40e-24396.12Show/hide
Query:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
        HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQEC+NIFATRGCKFCLAI DSSYSQRLHQERCQFSPVNSGLLARF
Subjt:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF

Query:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG
        ANLGIRDGST+IDSGRTRGSGAIALACKYVGGGSDGS+DICAKVCL+DEGENVIFYSYVKP+  VTNYRYETTGIRPEHIRDAMP+KQVQKKIQEILYNG
Subjt:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG

Query:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK
        GEKARILVG CVEDDLKRLQIGYPS MIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHR KE+YPMASDPQNK
Subjt:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK

Query:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
        NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
Subjt:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR

XP_022134352.1 RNA exonuclease 4 isoform X2 [Momordica charantia]3.68e-22185.55Show/hide
Query:  KNLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGL
        +++ HKCAACFRQFNKIEHLVDHMRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQEC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGL
Subjt:  KNLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGL

Query:  LARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEI
        LAR ANLGIRD S ++D GR R +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+ETTGIRPEH+RDAMP+KQVQKKIQEI
Subjt:  LARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEI

Query:  LYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASD
        LYNGGEKAR+LVGH VEDDLKRLQIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+  E YPMASD
Subjt:  LYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASD

Query:  PQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
        PQNKNNF IWR+NEL+RM+PE ML+ISRSDYYCWC+DLR
Subjt:  PQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR

XP_022938612.1 RNA exonuclease 4-like [Cucurbita moschata]1.12e-22688.96Show/hide
Query:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
        HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR 
Subjt:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF

Query:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG
        ANLGIRDGST ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKPIIPVTNYRYE TGIRPEH+RDAMP+KQVQKKIQ+ILYNG
Subjt:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG

Query:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK
        GEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR  E +PMASDPQNK
Subjt:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK

Query:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
        NNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Subjt:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR

XP_022993635.1 RNA exonuclease 4-like [Cucurbita maxima]5.53e-22788.96Show/hide
Query:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
        HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR 
Subjt:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF

Query:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG
        ANLGIRDGST ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKP IPVTNYRYETTGIRPEH+RDAMP+KQVQKKIQ+ILYNG
Subjt:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG

Query:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK
        GEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR  E +PMASDPQNK
Subjt:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK

Query:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
        NNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Subjt:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR

XP_023551468.1 RNA exonuclease 4-like [Cucurbita pepo subsp. pepo]2.82e-22287.46Show/hide
Query:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
        HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQR+HQERCQFS VNSGLLAR 
Subjt:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF

Query:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG
        A+LGIRDGST ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE EN++FYSYVKPIIPVTNYRYETTGIRPEH+RDAMP+KQVQKKIQ+ILYNG
Subjt:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG

Query:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK
        GEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QD Y+ C+  MRLYKRMRSQVHR  E +PMASDPQNK
Subjt:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK

Query:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
        NNFA WRENEL+RMSPEQMLEISRSDYYCWCMDLR
Subjt:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR

TrEMBL top hitse value%identityAlignment
A0A1S3C947 RNA exonuclease 41.5e-16381.4Show/hide
Query:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
        HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
Subjt:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF

Query:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG
        ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE TG+RPEH+RDAMP+KQVQKKIQE L NG
Subjt:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG

Query:  GE----------KARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSQVHRRKE
         +          KARILVGH +++ L  LQI YPS+MIRDTA YPPLMK+SKL NSL YL Q YLG++++NG + + YEEC+  MRLY +M+SQVH+R+E
Subjt:  GE----------KARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSQVHRRKE

Query:  SYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
         YP+ASDP NK NFAIW++ EL++M+P+Q+L+ISRSDYYCWC+D
Subjt:  SYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD

A0A6J1BXL4 RNA exonuclease 41.2e-17386.57Show/hide
Query:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
        HKCAACFRQFNKIEHLVDHMRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQEC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGLLAR 
Subjt:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF

Query:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG
        ANLGIRD S ++D GR R +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+ETTGIRPEH+RDAMP+KQVQKKIQEILYNG
Subjt:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG

Query:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK
        GEKAR+LVGH VEDDLKRLQIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH + E YPMASDPQNK
Subjt:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK

Query:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
        NNF IWR+NEL+RM+PE ML+ISRSDYYCWC+DLR
Subjt:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR

A0A6J1BZE0 RNA exonuclease 45.3e-17485.55Show/hide
Query:  KNLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGL
        +++ HKCAACFRQFNKIEHLVDHMRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQEC+NIF TRGCKFCLAILDS YSQRLHQERCQFS VNSGL
Subjt:  KNLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGL

Query:  LARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEI
        LAR ANLGIRD S ++D GR R +G +ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYR+ETTGIRPEH+RDAMP+KQVQKKIQEI
Subjt:  LARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEI

Query:  LYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASD
        LYNGGEKAR+LVGH VEDDLKRLQIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH + E YPMASD
Subjt:  LYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASD

Query:  PQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
        PQNKNNF IWR+NEL+RM+PE ML+ISRSDYYCWC+DLR
Subjt:  PQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR

A0A6J1FEK0 RNA exonuclease 43.6e-17888.96Show/hide
Query:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
        HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR 
Subjt:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF

Query:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG
        ANLGIRDGST ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKPIIPVTNYRYE TGIRPEH+RDAMP+KQVQKKIQ+ILYNG
Subjt:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG

Query:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK
        GEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVH R E +PMASDPQNK
Subjt:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK

Query:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
        NNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Subjt:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR

A0A6J1JZ30 RNA exonuclease 42.1e-17888.96Show/hide
Query:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
        HKCAACFRQFNKIEHLVDHMRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQEC+N+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR 
Subjt:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF

Query:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG
        ANLGIRDGST ID GRTRGSG +ALACKYVGGG DGSLD+CAKVCL+DE ENVIFYSYVKP IPVTNYRYETTGIRPEH+RDAMP+KQVQKKIQ+ILYNG
Subjt:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG

Query:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK
        GEKAR+LVGHCVEDDLKRLQIGYPS+MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVH R E +PMASDPQNK
Subjt:  GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNK

Query:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR
        NNFA WRE+EL+RMSPEQMLEISRSDYYCWCMDLR
Subjt:  NNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLR

SwissProt top hitse value%identityAlignment
O94375 RNA exonuclease 41.3e-2035.58Show/hide
Query:  IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIG
        IA+ C+ VG   D  + + A+V +V+   +V++ +YV+P   VT++R   +G++  H+RDA   ++VQ ++ +IL N     R+LVGH V +DLK L + 
Subjt:  IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIG

Query:  YPSVMIRDTANYPPLMKSSK-LCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQV
        +P  MIRDT+ +    K +K     LK LA+V LG D+Q+G     ++    M LYK+++ ++
Subjt:  YPSVMIRDTANYPPLMKSSK-LCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQV

Q6CMT3 RNA exonuclease 44.5e-2136.75Show/hide
Query:  RTRGSGA-IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVED
        RT G G  +++ C++VG G DG     A+V +V+   NV+   +V+P  PVT++R   +GI+P H+ +A+  +  QK++  +L     K RILVGH V  
Subjt:  RTRGSGA-IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVED

Query:  DLKRLQIGYPSVMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYK
        DL  L + +P  MIRDT+ + P  +  S     SLK L +  L  D+Q+G     E+    M LYK
Subjt:  DLKRLQIGYPSVMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYK

Q6PAQ4 RNA exonuclease 44.5e-2136.81Show/hide
Query:  AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQI
        A+AL C+ VG G  G   I A+V +V++    ++  YVKP  PVT+YR   +GIRPE+++     + V+K++ E+L     K RILVGH + +DLK L +
Subjt:  AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQI

Query:  GYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ
         +P   IRDT  + P     K    SLK L++  LG  +Q       ++   AMRLY  ++ +
Subjt:  GYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ

Q91560 RNA exonuclease 47.0e-2239.74Show/hide
Query:  IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIG
        +A+ C+ VG G DG   I A+V +V+     ++  YVKP   VT+YR   +GIRPE ++   P K VQK++ EIL     + R LVGH V +DLK L + 
Subjt:  IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIG

Query:  YPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY
        +P   IRDT  Y P  +  K    SLK L +  L   +Q G     ++   AMRLY
Subjt:  YPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY

Q9GZR2 RNA exonuclease 43.1e-2234.95Show/hide
Query:  LGIRDGSTIIDSGRTRGSG----AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILY
        LG  +GS  +   + +  G    A+AL C+ VG G  G   + A+V +V++    ++  YVKP  PVT+YR   +GIRPE+++    ++ VQK++ E+L 
Subjt:  LGIRDGSTIIDSGRTRGSG----AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILY

Query:  NGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ
            K RILVGH + +DLK L + +P   IRDT  Y P     K    SL+ L++  LG  +Q       ++   AMRLY  ++ +
Subjt:  NGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein2.0e-8041.64Show/hide
Query:  NLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSG
        ++ H+C AC++ FN+ EHLV+HM+ S+HS H+P C +C KHC+S +S+REHL  P  L K  C+ IF  RGC  CL I + +++   H+ +C  SP    
Subjt:  NLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSG

Query:  LLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQE
                  R+ S+ +   R +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  E ++D MP++ V++++  
Subjt:  LLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQE

Query:  IL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYP
         L    N G    +LVGH +  D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H       
Subjt:  IL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYP

Query:  MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
        + S     N     ++++L++M+ E++ + S S+Y CWC+D
Subjt:  MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD

AT2G48100.2 Exonuclease family protein2.0e-8041.64Show/hide
Query:  NLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSG
        ++ H+C AC++ FN+ EHLV+HM+ S+HS H+P C +C KHC+S +S+REHL  P  L K  C+ IF  RGC  CL I + +++   H+ +C  SP    
Subjt:  NLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSG

Query:  LLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQE
                  R+ S+ +   R +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  E ++D MP++ V++++  
Subjt:  LLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQE

Query:  IL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYP
         L    N G    +LVGH +  D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H       
Subjt:  IL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYP

Query:  MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
        + S     N     ++++L++M+ E++ + S S+Y CWC+D
Subjt:  MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD

AT2G48100.3 Exonuclease family protein2.0e-8041.64Show/hide
Query:  NLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSG
        ++ H+C AC++ FN+ EHLV+HM+ S+HS H+P C +C KHC+S +S+REHL  P  L K  C+ IF  RGC  CL I + +++   H+ +C  SP    
Subjt:  NLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSG

Query:  LLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQE
                  R+ S+ +   R +   A+AL C+ VGGG+DG++D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  E ++D MP++ V++++  
Subjt:  LLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQE

Query:  IL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYP
         L    N G    +LVGH +  D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H       
Subjt:  IL---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYP

Query:  MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
        + S     N     ++++L++M+ E++ + S S+Y CWC+D
Subjt:  MASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD

AT3G27970.1 Exonuclease family protein2.7e-13864.61Show/hide
Query:  MDYKN-------LSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQER
        MDY++       L +KCAAC+RQFNK+EHLV+HM+ S+HS HEPTC +CKKHCRS +SLREHLIGPLPKQEC+NIF+ RGC+FC+ IL+S  S+R+HQER
Subjt:  MDYKN-------LSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQER

Query:  CQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPM
        CQFS VNSGL  R A LG+RD   +ID   +R    +AL+CK VGGGSDGSLD+CA+VC+ DE +NVIF++YVKP + VT+YRYETTGIRPE++RDAMP+
Subjt:  CQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPM

Query:  KQVQKKIQEILYNG---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY
        KQVQ+KIQE L NG         G KARILVGH ++ DL RLQ+ YPS MIRDTA YPPLMK+SKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY
Subjt:  KQVQKKIQEILYNG---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY

Query:  KRMRSQVHRRKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
         RMR Q H + E+YP+A+D QN++N   WR++E +RMSP++ML ISRSDYYCWC+D
Subjt:  KRMRSQVHRRKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD

AT5G40310.1 Exonuclease family protein7.4e-13666.08Show/hide
Query:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF
        +KC  C+RQFNK EHLV+HMR S+HS HEPTC IC KHCRS DSLREHLIGPLPKQEC+NIF+ RGC+FCL IL+S  ++R+HQERCQ S V SGL+ R 
Subjt:  HKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARF

Query:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG
        A LG+R+ ST ID   +R    +AL+CK VGGGSDGSLD+CA+VC+ DE ENV+F++YVKP IPVTNYRYE TGIRPE++RDAM +K  Q+K+QE L NG
Subjt:  ANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNG

Query:  ---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESY
                   KARILVGH +++ L  LQ+ Y S MIRDTA YPPLMKSSKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR Q H R E+Y
Subjt:  ---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESY

Query:  PMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
        P+ASD QN NNFA WR+NEL+RMSPE++L++SRSDYYCWC+D
Subjt:  PMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTATAAGAATCTATCGCACAAGTGTGCAGCTTGTTTTAGGCAATTCAATAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACC
AACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGAT
GCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCAGTTAATTCTGGACTTCTTGCTCGTTTCGCCAACTTG
GGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTAGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACAT
ATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTC
CAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAA
GACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCT
AGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGA
GGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCT
AGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTATAAGAATCTATCGCACAAGTGTGCAGCTTGTTTTAGGCAATTCAATAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACC
AACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGAT
GCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCAGTTAATTCTGGACTTCTTGCTCGTTTCGCCAACTTG
GGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTAGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACAT
ATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTC
CAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAA
GACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCT
AGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGA
GGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCT
AGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGA
Protein sequenceShow/hide protein sequence
MDYKNLSHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANL
GIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVE
DDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEIS
RSDYYCWCMDLRT