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IVF0002005 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002005
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein SPIRAL1-like 5
Genome locationchr07:20326105..20327229
RNA-Seq ExpressionIVF0002005
SyntenyIVF0002005
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146520.1 protein SPIRAL1-like 5 [Cucumis sativus]1.25e-6497.03Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD H+NNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  D
        D
Subjt:  D

XP_008452039.1 PREDICTED: protein SPIRAL1-like 5 [Cucumis melo]5.34e-70100Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

XP_022136791.1 protein SPIRAL1-like 5 [Momordica charantia]2.31e-5788.24Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQP KPQVS+V+LPPPYGID++PDD   NNPSPSPKQLVS NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

XP_022941576.1 protein SPIRAL1-like 5 [Cucurbita moschata]1.35e-5890.2Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

XP_038883008.1 protein SPIRAL1-like 5 [Benincasa hispida]1.61e-6496.08Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD+++NNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

TrEMBL top hitse value%identityAlignment
A0A0A0KUV0 Uncharacterized protein6.7e-4897.03Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP DDH+NNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  D
        D
Subjt:  D

A0A1S3BTQ0 protein SPIRAL1-like 55.8e-52100Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A5D3CZ49 Protein SPIRAL1-like 55.8e-52100Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A6J1FLH4 protein SPIRAL1-like 52.2e-4390.2Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A6J1J7K0 protein SPIRAL1-like 52.2e-4390.2Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 12.6e-1747.01Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV-----------------SKNNYPRAHGQNSGNFITDRPST
        M RG S GGG+SSLGYLFG  + P KP ++    P    + ++ D        PSPK +                  S NNY RA GQN+GNF+TDRPST
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV-----------------SKNNYPRAHGQNSGNFITDRPST

Query:  KVKSAPGGDSSLGYLFG
        KV +APGG SSL YLFG
Subjt:  KVKSAPGGDSSLGYLFG

Q2QQ99 Protein SPIRAL1-like 39.4e-1549.49Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        M RG S GGG+SSLGYLFG  + P+  +      P P                P+  Q    NNY RA GQN GNF+TDRPSTKV++APGG SSL YLF
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Q7Y1L9 Protein SPIRAL1-like 11.4e-1851.75Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPR---KPQVSKVVLPPPYGIDLNPDDDHHNNPSP----SPKQLV-------SKNNYPRAHGQNSGNFITDRPSTKVK
        MSRGGS GGG+SSLGYLFG ++ P+   KP  +    P P              PSP    + KQ+        S NNY RA GQN+GNF+TDRPSTKV 
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPR---KPQVSKVVLPPPYGIDLNPDDDHHNNPSP----SPKQLV-------SKNNYPRAHGQNSGNFITDRPSTKVK

Query:  SAPGGDSSLGYLFG
        +APGG SSLGYLFG
Subjt:  SAPGGDSSLGYLFG

Q8LGD1 Protein SPIRAL1-like 56.9e-2660.58Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYL
        MSRGGS+GGG+SSLGYLFG D++ P+ P       P PPYG+D + ++DH  +  P     +S NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYL
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYL

Query:  FGDK
        FGDK
Subjt:  FGDK

Q9LE54 Protein SPIRAL1-like 21.2e-1752.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS
        M RG S GGG+SSLGYLFG  + P+   V+K            P      N   S KQ+       S NNY RA GQN+GNFITDRPSTKV SAPGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.9e-1847.01Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV-----------------SKNNYPRAHGQNSGNFITDRPST
        M RG S GGG+SSLGYLFG  + P KP ++    P    + ++ D        PSPK +                  S NNY RA GQN+GNF+TDRPST
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV-----------------SKNNYPRAHGQNSGNFITDRPST

Query:  KVKSAPGGDSSLGYLFG
        KV +APGG SSL YLFG
Subjt:  KVKSAPGGDSSLGYLFG

AT1G69230.1 SPIRAL1-like28.4e-1952.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS
        M RG S GGG+SSLGYLFG  + P+   V+K            P      N   S KQ+       S NNY RA GQN+GNFITDRPSTKV SAPGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

AT1G69230.2 SPIRAL1-like28.4e-1952.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS
        M RG S GGG+SSLGYLFG  + P+   V+K            P      N   S KQ+       S NNY RA GQN+GNFITDRPSTKV SAPGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV------SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

AT2G03680.1 spiral17.4e-1544Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSP-----------------SPKQLVSK---------NNYPRAHGQNSG
        M RG S GGG+SSL YLFG D    KP    V  P P   + N      N P+P                  P +L  +         NNY RA GQN+G
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSP-----------------SPKQLVSK---------NNYPRAHGQNSG

Query:  NFITDRPSTKVKSAPGGDSSLGYLF
        NF+TDRPSTKV +APGG SSL YLF
Subjt:  NFITDRPSTKVKSAPGGDSSLGYLF

AT4G23496.1 SPIRAL1-like54.9e-2760.58Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYL
        MSRGGS+GGG+SSLGYLFG D++ P+ P       P PPYG+D + ++DH  +  P     +S NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYL
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYL

Query:  FGDK
        FGDK
Subjt:  FGDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGTTCCTTAGGTTATCTTTTTGGTAAGGATGATCAACCTAGAAAGCCTCAAGTCTCCAAAGTTGTTCTTCCTCCTCC
TTATGGTATTGATCTCAACCCTGATGATGATCATCATAACAATCCTTCTCCCTCTCCAAAACAACTTGTTTCCAAGAATAATTATCCTCGAGCTCACGGCCAAAACTCCG
GCAACTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGCCCCGGGAGGTGATTCGTCGTTAGGGTATCTGTTTGGAGATAAGTGA
mRNA sequenceShow/hide mRNA sequence
CAAACACAACTTATTTTCAAGAAACCTTCCAAAAGTAAAAAAGAAACAAATTGACAAATTGCATAGCAATTTTGAACAGTGAATAGACCACCCAACTAGACATCATATCG
ACCACAACAACAAAAAAAGAAGACCCAAAATCACATAAATATCAATATATTATATATATAAACACACAGACACACTTCGCACTCATAAAGATCATATCATCATATATATA
TATATATATAAAAATTAACCAACCAAAATTAGGGTTTCAAACTTTCTTTTGTGTTCTTGGTGTAGTAAAGTTGAAGATCAGATCCACCCTCTCAAAGCGAAATATCATGA
GTAGAGGTGGAAGCTATGGTGGTGGAAGAAGTTCCTTAGGTTATCTTTTTGGTAAGGATGATCAACCTAGAAAGCCTCAAGTCTCCAAAGTTGTTCTTCCTCCTCCTTAT
GGTATTGATCTCAACCCTGATGATGATCATCATAACAATCCTTCTCCCTCTCCAAAACAACTTGTTTCCAAGAATAATTATCCTCGAGCTCACGGCCAAAACTCCGGCAA
CTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGCCCCGGGAGGTGATTCGTCGTTAGGGTATCTGTTTGGAGATAAGTGAAATATATGAATGAGTATGTCTTTTG
ATTTACTCTCTCTCTAGCTGACTATATATGAAAGAAAATTCTAAAGGGGTTATGGTTTAGTATGAGTGGTTTTTTTTCTAAATAAATGTGTGCTATTATTATGTTTAGTA
TTTGAAAGAAAACATATCAACATATATGTGTGTATGTGTATATATATAGTTTGGTGTAGCTTGTACTTGTGTTTATATAGTGATCTATTTGTTAAACAAATTAAATCTGA
TGATTCAGATATCTATGTATTGAAAAATAGCATCATGATGATTGTAGTTTTATTATGTGTCAATTTGTCAAAAAATGTGAGGACCATATACACATGAAATTGCTCTTTGT
TATTTAATTTGGGTG
Protein sequenceShow/hide protein sequence
MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLVSKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK