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IVF0002020 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002020
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr05:5892618..5893220
RNA-Seq ExpressionIVF0002020
SyntenyIVF0002020
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033822.1 uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]1.39e-6687.8Show/hide
Query:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS
        GV EEHKDKTYLAAFLSCWLCVFVFPDKQIS RPE FKVASLMAEGYTFSLAIPVLANIYS L QIHDS+SSLGHSN CFPIHYVH WLALYFNTHYKA 
Subjt:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS

Query:  TSLRGPCMVEFSGEGGAKYYTNL
        TSLRGPCMVEFSGEG      NL
Subjt:  TSLRGPCMVEFSGEGGAKYYTNL

KAA0048575.1 uncharacterized protein E6C27_scaffold61G002130 [Cucumis melo var. makuwa]6.51e-7778.62Show/hide
Query:  WSEVELNLFLDLGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGW
        W  + +      GVVEEHKDKTYLA FLS WLCVFVFPDKQ+   PEVF+VASLM EGYTFSL +PVL NIYSGL QIHDSTSSLGHSN CFP+HYVH W
Subjt:  WSEVELNLFLDLGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGW

Query:  LALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLEARMHIHKGK
        LA+YFNTHYKASTSLR PCMVEFSGEGG KYYTNLEA MHIHK K
Subjt:  LALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLEARMHIHKGK

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]2.55e-86100Show/hide
Query:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS
        GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS
Subjt:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS

Query:  TSLRGPCMVEFSGEGGAKYYTNLEARMHIHKG
        TSLRGPCMVEFSGEGGAKYYTNLEARMHIHKG
Subjt:  TSLRGPCMVEFSGEGGAKYYTNLEARMHIHKG

KAA0062705.1 uncharacterized protein E6C27_scaffold382G00250 [Cucumis melo var. makuwa]2.74e-12390.62Show/hide
Query:  MDHFQIPVSEWISFWVTRSKVKYPKPPARKPKKTSRPRSTHNPSGTPIKRPDWSEVELNLFLDLGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEV
        MDHFQIPVS+WISFWVTRS+VKYPKPP RKPKKTSRPRSTHNP+GTPIKR DWSEVELNLFLDLGVVEEHKDKTYLA  LSCWLCVFVFPDKQ S RPEV
Subjt:  MDHFQIPVSEWISFWVTRSKVKYPKPPARKPKKTSRPRSTHNPSGTPIKRPDWSEVELNLFLDLGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEV

Query:  FKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLEARMH
        FKVASLMAEGYTFSLAIPVL+NIYS LHQIHDSTSSLGHSN CFPIHYVH WL LYFNTHYKA TSLRGP MVEFSGEGGAKYYTNLEAR +
Subjt:  FKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLEARMH

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.82e-11685.5Show/hide
Query:  MDHFQIPVSEWISFWVTRSKVKYPKPPARKPKKTSRPRSTHNPSGTPIKRPDWSEVELNLFLDLGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEV
        MDH QI VSEWISFWVTRS+VKY KPP RKPKKTSRPRSTHNP G PI+RPDWS+ EL +FLDL V ++H+DKTYLAAFLSCWLCVFVFPDKQ+S RPEV
Subjt:  MDHFQIPVSEWISFWVTRSKVKYPKPPARKPKKTSRPRSTHNPSGTPIKRPDWSEVELNLFLDLGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEV

Query:  FKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLEARMHIHKGKYVS
        FKVASLMAEGYTFSLA+PVLANIYSGL Q+HDSTSSLG+SN CFP+HYVHGWLALYFNTHYKA  SLRGP MVEFSGEGGAKYYTNLEAR HIHKGKYVS
Subjt:  FKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLEARMHIHKGKYVS

TrEMBL top hitse value%identityAlignment
A0A5A7SRI5 Uncharacterized protein1.0e-5587.8Show/hide
Query:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS
        GV EEHKDKTYLAAFLSCWLCVFVFPDKQIS RPE FKVASLMAEGYTFSLAIPVLANIYS L QIHDS+SSLGHSN CFPIHYVH WLALYFNTHYKA 
Subjt:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS

Query:  TSLRGPCMVEFSGEGGAKYYTNL
        TSLRGPCMVEFSGEG      NL
Subjt:  TSLRGPCMVEFSGEGGAKYYTNL

A0A5A7U4C3 Uncharacterized protein2.6e-72100Show/hide
Query:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS
        GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS
Subjt:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS

Query:  TSLRGPCMVEFSGEGGAKYYTNLEARMHIHKG
        TSLRGPCMVEFSGEGGAKYYTNLEARMHIHKG
Subjt:  TSLRGPCMVEFSGEGGAKYYTNLEARMHIHKG

A0A5A7U4M3 Uncharacterized protein2.7e-6184.96Show/hide
Query:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS
        GVVEEHKDKTYLA FLS WLCVFVFPDKQ+   PEVF+VASLM EGYTFSL +PVL NIYSGL QIHDSTSSLGHSN CFP+HYVH WLA+YFNTHYKAS
Subjt:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS

Query:  TSLRGPCMVEFSGEGGAKYYTNLEARMHIHKGK
        TSLR PCMVEFSGEGG KYYTNLEA MHIHK K
Subjt:  TSLRGPCMVEFSGEGGAKYYTNLEARMHIHKGK

A0A5D3DAL3 PMD domain-containing protein4.7e-9890.62Show/hide
Query:  MDHFQIPVSEWISFWVTRSKVKYPKPPARKPKKTSRPRSTHNPSGTPIKRPDWSEVELNLFLDLGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEV
        MDHFQIPVS+WISFWVTRS+VKYPKPP RKPKKTSRPRSTHNP+GTPIKR DWSEVELNLFLDLGVVEEHKDKTYLA  LSCWLCVFVFPDKQ S RPEV
Subjt:  MDHFQIPVSEWISFWVTRSKVKYPKPPARKPKKTSRPRSTHNPSGTPIKRPDWSEVELNLFLDLGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEV

Query:  FKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLEARMH
        FKVASLMAEGYTFSLAIPVL+NIYS LHQIHDSTSSLGHSN CFPIHYVH WL LYFNTHYKA TSLRGP MVEFSGEGGAKYYTNLEAR +
Subjt:  FKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLEARMH

A0A5D3DEA3 Uncharacterized protein1.0e-5587.8Show/hide
Query:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS
        GV EEHKDKTYLAAFLSCWLCVFVFPDKQIS RPE FKVASLMAEGYTFSLAIPVLANIYS L QIHDS+SSLGHSN CFPIHYVH WLALYFNTHYKA 
Subjt:  GVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKAS

Query:  TSLRGPCMVEFSGEGGAKYYTNL
        TSLRGPCMVEFSGEG      NL
Subjt:  TSLRGPCMVEFSGEGGAKYYTNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCACTTTCAAATCCCTGTGAGCGAATGGATCTCTTTCTGGGTAACGCGATCTAAGGTAAAATATCCGAAGCCACCAGCCCGAAAGCCAAAAAAAACTTCTCGCCC
CCGCTCAACACATAATCCAAGTGGAACTCCCATCAAACGTCCTGACTGGTCTGAAGTTGAACTCAATTTATTCCTTGATTTAGGCGTTGTAGAAGAACACAAGGATAAAA
CCTATCTGGCGGCGTTTCTCTCTTGCTGGTTGTGTGTGTTTGTGTTTCCTGACAAACAAATTTCCTTTCGTCCGGAGGTTTTTAAAGTTGCTAGCCTTATGGCAGAAGGC
TACACCTTTAGCCTTGCTATCCCTGTTTTAGCCAATATTTATAGTGGCCTACACCAGATTCATGATTCCACTTCGTCACTTGGTCATTCTAATGTATGTTTTCCTATTCA
CTATGTTCATGGGTGGCTTGCCCTTTACTTCAACACCCATTATAAGGCCTCTACTAGTCTTAGGGGTCCCTGTATGGTTGAGTTTTCTGGTGAAGGTGGGGCCAAATACT
ATACTAATCTTGAGGCTCGTATGCATATTCACAAGGGAAAGTATGTATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCACTTTCAAATCCCTGTGAGCGAATGGATCTCTTTCTGGGTAACGCGATCTAAGGTAAAATATCCGAAGCCACCAGCCCGAAAGCCAAAAAAAACTTCTCGCCC
CCGCTCAACACATAATCCAAGTGGAACTCCCATCAAACGTCCTGACTGGTCTGAAGTTGAACTCAATTTATTCCTTGATTTAGGCGTTGTAGAAGAACACAAGGATAAAA
CCTATCTGGCGGCGTTTCTCTCTTGCTGGTTGTGTGTGTTTGTGTTTCCTGACAAACAAATTTCCTTTCGTCCGGAGGTTTTTAAAGTTGCTAGCCTTATGGCAGAAGGC
TACACCTTTAGCCTTGCTATCCCTGTTTTAGCCAATATTTATAGTGGCCTACACCAGATTCATGATTCCACTTCGTCACTTGGTCATTCTAATGTATGTTTTCCTATTCA
CTATGTTCATGGGTGGCTTGCCCTTTACTTCAACACCCATTATAAGGCCTCTACTAGTCTTAGGGGTCCCTGTATGGTTGAGTTTTCTGGTGAAGGTGGGGCCAAATACT
ATACTAATCTTGAGGCTCGTATGCATATTCACAAGGGAAAGTATGTATCATGA
Protein sequenceShow/hide protein sequence
MDHFQIPVSEWISFWVTRSKVKYPKPPARKPKKTSRPRSTHNPSGTPIKRPDWSEVELNLFLDLGVVEEHKDKTYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEG
YTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLEARMHIHKGKYVS