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IVF0002030 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002030
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBHLH domain-containing protein
Genome locationchr12:21149462..21152514
RNA-Seq ExpressionIVF0002030
SyntenyIVF0002030
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0090575 - RNA polymerase II transcription factor complex (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR015660 - Achaete-scute transcription factor-related


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146605.1 transcription factor bHLH162 isoform X1 [Cucumis sativus]6.06e-4692.22Show/hide
Query:  MEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGI
        MEEDEEAEGRRRRR +E ETKPKL + VKAHQIGSSVEVFLTTGSDYHF LQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGI
Subjt:  MEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGI

XP_008442634.2 PREDICTED: transcription factor bHLH118-like [Cucumis melo]7.19e-5488.79Show/hide
Query:  MEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQ-------EM
        MEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIG        + 
Subjt:  MEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQ-------EM

Query:  VKGFVRQ
        VK FV Q
Subjt:  VKGFVRQ

XP_031737221.1 transcription factor bHLH162 isoform X2 [Cucumis sativus]1.42e-4180.2Show/hide
Query:  MEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDG------EGIGQEM
        MEEDEEAEGRRRRR +E ETKPKL + VKAHQIGSSVEVFLTTGSDYHF LQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQ +       EG G  M
Subjt:  MEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDG------EGIGQEM

Query:  V
        +
Subjt:  V

XP_031737224.1 transcription factor bHLH162 isoform X3 [Cucumis sativus]8.11e-4290.59Show/hide
Query:  MEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV
        MEEDEEAEGRRRRR +E ETKPKL + VKAHQIGSSVEVFLTTGSDYHF LQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQ+
Subjt:  MEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV

XP_038876951.1 transcription factor bHLH162-like [Benincasa hispida]2.10e-3266.34Show/hide
Query:  EGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTG-SDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGI----GQ---EMVKGFVR
        E  +RR+ +HE +P LLLQVKAH++GSSVEVFLTTG SDYHFILQQ++RLLQ NGA ILN+NQS+   R FHKITAQVDGEG+    G+   E VK FV 
Subjt:  EGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTG-SDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGI----GQ---EMVKGFVR

Query:  Q
        Q
Subjt:  Q

TrEMBL top hitse value%identityAlignment
A0A0A0LUL3 BHLH domain-containing protein2.2e-3592.22Show/hide
Query:  MEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGI
        MEEDEEAEGRRRRR +E ETKPKL + VKAHQIGSSVEVFLTTGSDYHF LQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGI
Subjt:  MEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGI

A0A1S3B660 transcription factor bHLH118-like1.6e-4188.79Show/hide
Query:  MEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQ-------EM
        MEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIG        + 
Subjt:  MEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQ-------EM

Query:  VKGFVRQ
        VK FV Q
Subjt:  VKGFVRQ

A0A6J1JZ96 transcription factor bHLH167-like4.6e-1753.68Show/hide
Query:  EEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQEMVKG
        E+ E+  G R    E E K +LL+QV+AHQ+GSS+EV LTTGSDY  +L Q+L+LLQ+NG +I+++N S   +RVFHKI AQ+ GEG+  E V G
Subjt:  EEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQEMVKG

A0A6J1K2Y3 transcription factor bHLH167-like1.9e-1855.79Show/hide
Query:  EEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQEMVKG
        E+ E+  G R    E ETK +LL+QV+AHQ+GSS+EV LTTGSDY F+L Q+L+LLQ+NG +I+ +N S   DRVFHKI A++ GEG   E  KG
Subjt:  EEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQEMVKG

A0A6J1K483 transcription factor bHLH162-like2.7e-1754.43Show/hide
Query:  ETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQEMVKG
        E K ++++QV+AH +GSS+E+ LTTGSDYH +L+Q+++LLQ+NG EI+++NQS   +R FHKI AQ+ GEG   E  KG
Subjt:  ETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQEMVKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGATGAAGAAGCAGAAGGAAGAAGAAGAAGAAGATTTGAACATGAAACAAAACCTAAATTATTGCTACAAGTTAAAGCTCATCAAATTGGTTCTTCAGTGGA
AGTGTTTTTGACCACTGGATCAGACTATCACTTTATTCTTCAACAAGTCCTTCGACTTCTTCAAGATAATGGAGCCGAGATCCTCAATGTCAACCAGTCCATGTTCACAG
ATCGGGTTTTCCATAAGATAACGGCTCAGGTGGATGGAGAAGGAATAGGGCAGGAGATGGTGAAAGGATTTGTAAGACAGTGA
mRNA sequenceShow/hide mRNA sequence
AGGGTTTTGTGAAAAGCTCTCAATAATGTCGAACCCTATCCGTTGTCAGCCAACTCCACAAAGCGATCGAAAATTCGTAGAAAGGAATCGAAGGAAAGAAATGAAATCCC
TTTTCTCGACACTAAATTCTCTTCTTCCAAATCATACCTCAAGGGAAGCTCCAAGAACAGTGCCGGATCAACTTGAAGATGCCACGAATTACATAAAAGAATTACAAAAG
AACATACAGAAATTGAAAGAGAAGAAAGAGGAGCTAATGGGAAAAAAATAAAATGGAAGAAGATGAAGAAGCAGAAGGAAGAAGAAGAAGAAGATTTGAACATGAAACAA
AACCTAAATTATTGCTACAAGTTAAAGCTCATCAAATTGGTTCTTCAGTGGAAGTGTTTTTGACCACTGGATCAGACTATCACTTTATTCTTCAACAAGTCCTTCGACTT
CTTCAAGATAATGGAGCCGAGATCCTCAATGTCAACCAGTCCATGTTCACAGATCGGGTTTTCCATAAGATAACGGCTCAGGTGGATGGAGAAGGAATAGGGCAGGAGAT
GGTGAAAGGATTTGTAAGACAGTGAAGAAATTGTTTCACAGTACAAGATGAGCAATGCAGTGTGATTACAATGGCAATGGCAATGGCAATGGCATGGTGGGGAAGATTTA
TGAAGCCATTTATTATTGTACTGTCTTTTATGGATAATTAATGCTTGAAATCAAACCATCCCATTATTATTATATCATAATGTTCCTTTGCATTATTATTGGTGAATTAT
CCATATAATCCCAAATTGTTTGTTTT
Protein sequenceShow/hide protein sequence
MEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGQEMVKGFVRQ