CuGenDBv2

Gene ID	IVF0002041
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	rRNA-processing protein EFG1
Genome location	tig00000135:1352131..1355274
RNA-Seq Expression	IVF0002041
Synteny	IVF0002041
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component) GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domains	IPR019310 - rRNA-processing protein Efg1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134104.1 rRNA-processing protein EFG1 isoform X1 [Cucumis sativus]

3.63e-191

92.51

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------
        SDEADADDEWTDKSTREQA STSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRS        
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------

Query:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV
               QSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV

XP_011650949.1 rRNA-processing protein EFG1 isoform X2 [Cucumis sativus]

1.07e-187

91.92

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------
        SDEADADDEWTDKSTREQA STSGKAASGMSSDEKNHQ  ISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRS        
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------

Query:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV
               QSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV

XP_016899108.1 PREDICTED: rRNA-processing protein EFG1 [Cucumis melo]

2.74e-188

92.81

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------
        SDEADADDEWTDKSTREQA STSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS        
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------

Query:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV
               QSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877104.1 rRNA-processing protein efg1-like isoform X1 [Benincasa hispida]

3.45e-184

90.72

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------
        SDEADADDEWTDKSTREQA STSGKAASGMSSDE+NHQRQISAR LMPPPRPTKSFSSSAQA +KAGSSLRKSSTNHRAEFSTSSNTSG RS        
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------

Query:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV
               QSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877105.1 rRNA-processing protein efg1-like isoform X2 [Benincasa hispida]

1.01e-180

90.12

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------
        SDEADADDEWTDKSTREQA STSGKAASGMSSDE+NHQ  ISAR LMPPPRPTKSFSSSAQA +KAGSSLRKSSTNHRAEFSTSSNTSG RS        
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------

Query:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV
               QSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7B4 rRNA-processing protein EFG1

1.1e-149

92.51

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------
        SDEADADDEWTDKSTREQA STSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRS        
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------

Query:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV
               QSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV

A0A1S4DT25 rRNA-processing protein EFG1

1.3e-147

92.81

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------
        SDEADADDEWTDKSTREQA STSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS        
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS--------

Query:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV
               QSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  -------QSSNISSNSDAHKPRRKRRPKKKKQQV

A0A5A7U718 rRNA-processing protein EFG1

6.1e-140

94.72

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSQSSNISSN
        SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNH  QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS S     +
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSQSSNISSN

Query:  SDA
        S++
Subjt:  SDA

A0A6J1G415 rRNA-processing protein EFG1

6.5e-134

85.93

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+ QEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------
        SDEADADDEWTDKS RE A STSGKAASGMSSDE+NHQR QISARALMPPPRPTKSF SSAQA +K GSSLRK STN RAE S+SSNTS  RS       
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------

Query:  --------QSSNISSNSDAHKPRRKRRPKKKKQQ
                 SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  --------QSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1IBA9 rRNA-processing protein EFG1

6.5e-134

85.93

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL
        MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+ QEKKLEGLRKQQEIHSRLAVERKIFLRDRKI F  RRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRL

Query:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLE+ GSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------
        SDEADADDEWTDKS RE A STSGKAASGMSSDE+NHQR QISARALMPPPRPTKSF SSAQA +K GSSLRK STN RAE S+SSNTS  RS       
Subjt:  SDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS-------

Query:  --------QSSNISSNSDAHKPRRKRRPKKKKQQ
                 SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  --------QSSNISSNSDAHKPRRKRRPKKKKQQ

SwissProt top hits

e value

%identity

Alignment

Q09867 rRNA-processing protein efg1

8.5e-06

Show/hide

Query:  KKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEK-LQRAPSGQFQDSDVADQLSK
        K P    LK +IR  ER+L+K NLPA +R   E+ L GL++Q  +      ++KIF R +K+ F  R+K ERRI++LEK L+       +       + K
Subjt:  KKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIERRIRRLEK-LQRAPSGQFQDSDVADQLSK

Query:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEDGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDK
         + DL Y++ +P   KYV+L+         ++ ++ R +I A +     SG+  +  S     + + E        SS   D +DE+  +
Subjt:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEDGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDK

Q2UEF7 rRNA-processing protein efg1

7.9e-04

28.4

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Query:  PKSVSLKNQIRSAERML-RKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFLRRK-IERRIRRLEKLQRAPSGQFQDS--------DVA
        P    LK +IR  +R+L R +LPA+ R  QE+ L G     E   +     K+  +   + FL RK   + ++RLE+ ++  SG   DS         +A
Subjt:  PKSVSLKNQIRSAERML-RKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFLRRK-IERRIRRLEKLQRAPSGQFQDS--------DVA

Query:  DQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEDG
         +L   + +L Y  ++P  E+Y+AL+  +         KK +E +K         G + EDG
Subjt:  DQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEDG

Arabidopsis top hits

e value

%identity

Alignment

AT1G04230.1 Protein of unknown function (DUF2361)

1.1e-93

64.31

Show/hide

Query:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIE
        MAHGGY +RRV         +RRSKGL VEKKPK+ SLKNQIRS  RM+RK+LP EVR+A EKKL+ L+KQQ+IH RLA ERKIFLR+RK+ F  RRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIE

Query:  RRIRRLEKLQRAPSGQF-QDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDD
        R IRRLEKL R+ SG + QD+++  QL++LKEDLEYVRFFPK EKYV+LF+GSDD  + +RR KLR+QIKAN+I AAASGK+LE+ GSEDD LLD+S+DD
Subjt:  RRIRRLEKLQRAPSGQF-QDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDD

Query:  FFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSQ
        FF+ GSSSDEADADDEWTDKST+E   S SG+A S MSSDE+N Q+  S R LMPPPR   + +S   +  K       S+T+HR   S+ + TS   SQ
Subjt:  FFLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSQ

Query:  SSNISSNSDAHKPRRKRRPKKKKQQ
        SSN+SSNSDAHKP+RKRRPKKKK Q
Subjt:  SSNISSNSDAHKPRRKRRPKKKKQQ

AT5G43720.1 Protein of unknown function (DUF2361)

5.5e-93

63.64

Show/hide

Query:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIE
        MAHGGY KRR +       ++RRSK L VEKKPK+VS+KNQ+RS ER LRK+LP EVR++  +KLE L+KQQ+ H+RLAVERKIF R+RKI F  RRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFL-RRKIE

Query:  RRIRRLEKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDF
        R IRRLEKLQR  S    D D+A+QLSKLKEDLEYVRFFPK EKYV+LFTG++DS+++++R K+R+QIKAN+I AAASGK+LE+ GSEDDGLLD+S+DDF
Subjt:  RRIRRLEKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLED-GSEDDGLLDMSEDDF

Query:  FLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAG---SSLRKSSTNHRAEFSTSSNTSGGR
        F  GSSSDEADADDE TDKS +E A S SG+A SGMSSDE+N Q+Q S RALMPPP+     +S    + +     SS R +++N R+E S ++  S   
Subjt:  FLCGSSSDEADADDEWTDKSTREQAYSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAG---SSLRKSSTNHRAEFSTSSNTSGGR

Query:  ---SQSSNISSNSDAHKPRRKRRPKKKKQQ
           SQSSN+SSNSDAHKP+RKRRPKKKKQQ
Subjt:  ---SQSSNISSNSDAHKPRRKRRPKKKKQQ

Sequences

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CDS sequence

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ATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCGGCACGCCGATCGAAGGGTTTGGCCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCG
ATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAG
TTGAGCGCAAAATATTCTTGCGCGACAGGAAGATAAATTTTTTGAGGAGAAAAATTGAAAGAAGAATTAGGCGGCTTGAGAAACTTCAGCGTGCTCCATCTGGCCAGTTT
CAAGATTCAGATGTTGCAGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAAGTGATGA
TTCAGACATGGTTGATAGGAGAAAGAAGTTACGTGAGCAGATTAAAGCCAATTTGATTGCTGCGGCTGCTAGTGGAAAGGATTTAGAAGACGGTAGTGAGGATGATGGGT
TGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGGAACAAGCTTACAGTACT
TCCGGCAAAGCAGCATCCGGCATGTCTAGTGATGAAAAAAATCATCAGAGGCAGATTTCTGCCAGAGCCTTGATGCCTCCTCCTCGTCCTACCAAATCATTTTCAAGTTC
AGCTCAAGCTTGGACAAAAGCTGGATCTTCGTTGAGAAAATCTTCCACAAATCACAGGGCTGAATTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTCAGAGCAGTA
ATATAAGTTCCAATTCTGATGCACACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAACAGGTATGA

mRNA sequence

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Protein sequence

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MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKINFLRRKIERRIRRLEKLQRAPSGQF
QDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEDGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAYST
SGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSQSSNISSNSDAHKPRRKRRPKKKKQQV

IVF0002041 (gene) of Melon (IVF77) v1 genome