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IVF0002053 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002053
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr09:7662650..7662844
RNA-Seq ExpressionIVF0002053
SyntenyIVF0002053
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036590.1 polyprotein [Cucumis melo var. makuwa]1.33e-1662.3Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMA
        M+LIK+Y YTIAYH +K NVV D  SRKS N  +R  + LL+ELRGFK +LN G S+NLMA
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMA

KAA0054749.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.04e-1558.73Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF
        MELIK+Y+YTIAYHP K NVV +ALSRK+P+ + + RI  +KELR  K +LN G + NL+A F
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF

KAA0058456.1 CCHC-type integrase [Cucumis melo var. makuwa]8.56e-1757.14Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF
        M+LIK+YD TI YH  K N++ DALS K P+P++R R+ LL+EL+GFK +L   TS NLMA F
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF

KAA0060440.1 retrotransposon protein [Cucumis melo var. makuwa]1.59e-1360.61Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRE---RITLLKELRGFKVVLNVGTSRNLMAHF
        +ELIK+YD+TI YHP K NVV DALSRKS  PKS     R+ LL ELRG KVV+    SR+L+A F
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRE---RITLLKELRGFKVVLNVGTSRNLMAHF

KAA0067194.1 polyprotein [Cucumis melo var. makuwa]6.03e-2168.25Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF
        M+LIK+YD TIAY+PRKVNV+ DALSRKS +P+++ R+ LLK+LRGFKVVLN GT  N MA F
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF

TrEMBL top hitse value%identityAlignment
A0A5A7SZR3 Polyprotein1.8e-1162.3Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMA
        M+LIK+Y YTIAYH +K NVV D  SRKS N  +R  + LL+ELRGFK +LN G S+NLMA
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMA

A0A5A7UMR3 DNA/RNA polymerases superfamily protein5.3e-1158.73Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF
        MELIK+Y+YTIAYHP K NVV +ALSRK+P+ + + RI  +KELR  K +LN G + NL+A F
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF

A0A5A7UWA6 CCHC-type integrase4.1e-1157.14Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF
        M+LIK+YD TI YH  K N++ DALS K P+P++R R+ LL+EL+GFK +L   TS NLMA F
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF

A0A5A7UZA9 Retrotransposon protein2.7e-1060.61Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSR---ERITLLKELRGFKVVLNVGTSRNLMAHF
        +ELIK+YD+TI YHP K NVV DALSRKS  PKS     R+ LL ELRG KVV+    SR+L+A F
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSR---ERITLLKELRGFKVVLNVGTSRNLMAHF

A0A5A7VIK8 Polyprotein1.8e-1468.25Show/hide
Query:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF
        M+LIK+YD TIAY+PRKVNV+ DALSRKS +P+++ R+ LLK+LRGFKVVLN GT  N MA F
Subjt:  MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTATTAAGAATTATGACTACACCATTGCATACCACCCTAGAAAAGTGAACGTTGTAGTCGACGCGTTGAGTAGGAAGAGTCCCAACCCAAAGAGCAGAGAGAG
GATAACTCTATTAAAAGAATTGAGAGGCTTCAAGGTGGTTCTCAACGTAGGAACATCTAGGAACTTGATGGCGCACTTCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTATTAAGAATTATGACTACACCATTGCATACCACCCTAGAAAAGTGAACGTTGTAGTCGACGCGTTGAGTAGGAAGAGTCCCAACCCAAAGAGCAGAGAGAG
GATAACTCTATTAAAAGAATTGAGAGGCTTCAAGGTGGTTCTCAACGTAGGAACATCTAGGAACTTGATGGCGCACTTCCTATGA
Protein sequenceShow/hide protein sequence
MELIKNYDYTIAYHPRKVNVVVDALSRKSPNPKSRERITLLKELRGFKVVLNVGTSRNLMAHFL