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IVF0002058 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002058
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:26307150..26307317
RNA-Seq ExpressionIVF0002058
SyntenyIVF0002058
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053728.1 retrotransposon protein [Cucumis melo var. makuwa]6.08e-29100Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
        MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]2.16e-2892.59Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
        MTYC++VDD+DEGDSTY TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]1.86e-2994.44Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
        MTYCD++DD+DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]4.53e-32100Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
        MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]1.07e-2890.91Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
        MTYC++VDD+DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT+WQLRN+
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
TrEMBL top hitse value%identityAlignment
A0A5A7TPW4 Retrotransposon protein1.3e-2194.55Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
        MTYCD+VDDK+EGDSTYATTTASEDIQYIETTNEWSQWR+DLAESMFTEWQLRNT
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
A0A5A7UF58 Retrotransposon protein4.0e-23100Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
        MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
A0A5A7UG16 Retrotransposon protein2.9e-2194.44Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
        MTYCD+V+D+DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
A0A5A7V4Q8 Retrotransposon protein1.3e-2194.44Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
        MTYCD++DD+DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN
A0A5D3BYY4 Retrotransposon protein4.0e-23100Show/hide
Query:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
        MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGAAGTTGACGACAAGGACGAGGGGGACTCCACGTACGCGACAACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACTTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGAAGTTGACGACAAGGACGAGGGGGACTCCACGTACGCGACAACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACTTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACACTTAG
Protein sequenceShow/hide protein sequence
MTYCDEVDDKDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNT