; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002148 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002148
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr05:24278469..24280056
RNA-Seq ExpressionIVF0002148
SyntenyIVF0002148
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR033443 - Pentacotripeptide-repeat region of PRORP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063642.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.06e-240100Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

XP_004139374.1 pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus]2.35e-22895.63Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        MNIGRTKTSAFLLNFHHFL Q SSIHSISPSQTLQDSIKAAVESKSYKKLP LFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLI +RPRSKSQF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GC+PDLESYGTLI AATAVRRTDKAVELLKEMVVKVKLMPRQ TI NVVAALR NREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKV 
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        M MTDRGFIPYIKVRQ+VVEGL GIGE+ELASAVRRRFVELGS
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

XP_008455557.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo]6.14e-24099.71Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRS AKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

XP_022971046.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]4.44e-19481.05Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        M +G  +TS+FLL+FH FL  CSS+ SI+P+QTLQ+SIKAAVESKSYKKLP LFPSLQEAC NPN F FLSTFP+N RTQVVDEILQSLI +RPRS+ QF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGC P PQTH LLSSAWLKQR Q+KSVA+IL+DM+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GCVPDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL PR+ T+INVVAALRANRE+RRAVEIIELLE++S++VGFESYE+LVEGCLECREYILAGKV+
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        M MT++G+IPYI+VR KVVEGL GIGE ELASAVRRRF EL S
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

XP_038902935.1 pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida]1.02e-20486.88Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        MNIGRTKTSAFLL FH FL Q SSIHSISPSQ LQ+SIKAAVESKSYKKLP LFPSL+EACHNPNLFLFLSTFP+N+RTQ+VDEILQSLI +RPRS+SQF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VH SLLFYTLQ  SPFPLSLPVLQRILHSG VP+PQTH LLSSAWLKQRSQ+KSVANILMDM+SIGYKPDSNICNY+ISSLC+  ELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GC PDLESYGTLI A TAVR+TDKAVELLKEMV+KVKL PRQ TIINVVAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLECREYILAGKV 
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        M MT+RGFIPYIKVRQKVVEGL GIGE E ASAVRR+FV L S
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein1.0e-17795.63Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        MNIGRTKTSAFLLNFHHFL Q SSIHSISPSQTLQDSIKAAVESKSYKKLP LFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLI +RPRSKSQF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GC+PDLESYGTLI AATAVRRTDKAVELLKEMVVKVKLMPRQ TI NVVAALR NREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKV 
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        M MTDRGFIPYIKVRQ+VVEGL GIGE+ELASAVRRRFVELGS
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

A0A1S3C1B6 pentatricopeptide repeat-containing protein At1g062701.6e-18699.71Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRS AKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

A0A5D3D4C7 Pentatricopeptide repeat-containing protein4.2e-187100Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062701.8e-15080.17Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        M +G  +TS+FLL+FH FL QCSS+ SI+P+Q+LQ+SI+AAVESKSY+KLP LFPSLQEAC NPN F FLSTFP+N RT VVDEILQSLI +RPRS+ QF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGCVP PQTH LLSS WLKQR Q+KSVA+IL++M+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GCVPDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL PRQ T+INVVAALRANRE+RRAVEIIELLE++S++VGFESYE+LVEGCLECREYILAGKV+
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        M MT++G+IPYI+VR KVVEGL GIGE ELASAVRRRF EL S
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062701.3e-15181.05Show/hide
Query:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF
        M +G  +TS+FLL+FH FL  CSS+ SI+P+QTLQ+SIKAAVESKSYKKLP LFPSLQEAC NPN F FLSTFP+N RTQVVDEILQSLI +RPRS+ QF
Subjt:  MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQF

Query:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGC P PQTH LLSSAWLKQR Q+KSVA+IL+DM+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI
        GCVPDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL PR+ T+INVVAALRANRE+RRAVEIIELLE++S++VGFESYE+LVEGCLECREYILAGKV+
Subjt:  GCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI

Query:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS
        M MT++G+IPYI+VR KVVEGL GIGE ELASAVRRRF EL S
Subjt:  MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS

SwissProt top hitse value%identityAlignment
O49436 Pentatricopeptide repeat-containing protein At4g200906.1e-1022.92Show/hide
Query:  TQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLI
        T++VD +          + +  +HG  L   L        ++ +L+R++ S C+P+  T+  L +  +KQR +A     +L  M+  GY  + +I + LI
Subjt:  TQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLI

Query:  SSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFE
        S L   G+  EA  + + M   GC P++  Y  L+       + ++A E+L  M+     +P   T  +++           AV++ + +++        
Subjt:  SSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFE

Query:  SYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKVVEGLYGIGELELA
         Y +L++G         A  V   M   G  P       +++GL GIG ++ A
Subjt:  SYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKVVEGLYGIGELELA

Q3ECK2 Pentatricopeptide repeat-containing protein At1g62680, mitochondrial1.2e-0829.71Show/hide
Query:  LSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAAT
        L+L +L ++L  G  P   T   L + + + R++     +++  M  IGYKPD    N +I SLC    + +AF   K +   G  P++ +Y  L+    
Subjt:  LSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAAT

Query:  AVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEG-CLECR
           R   A  LL +M +K K+ P   T   ++ A   N +V  A E+ E + R S D    +Y  L+ G CL  R
Subjt:  AVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEG-CLECR

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062702.4e-9155.21Show/hide
Query:  SISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRI
        SIS  + ++ +IK AVE+K Y ++P L  SL+E   N  LF FLS F  + R +V+DEILQS + VRPRS  + V+ SLL Y LQS  P PLS  +LQR 
Subjt:  SISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRI

Query:  LHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAV
        L SGC+P+PQTH LLS AWL++R  ++SVA+I+ +M+ IGY PD+  CNYL+SSLC++ +L EA +V++ M  AGC+PD+ESYG +I +    R+T   V
Subjt:  LHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAV

Query:  ELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKVVEGLYGIG
        +++KEMV K  + PR+  +  V AALRANRE+ +A+E+IE +E   + V FESYE++VEGCLE REYILAGKV+M MTDRGFIPYIKVRQKVVE L  IG
Subjt:  ELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKVVEGLYGIG

Query:  ELELASAVRRRFVELGS
        E +LA  VR+R  EL S
Subjt:  ELELASAVRRRFVELGS

Q9SR00 Pentatricopeptide repeat-containing protein At3g04760, chloroplastic5.2e-0923.4Show/hide
Query:  PNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKS-QFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDM
        P++F + +      +   +D+  + L  +R +  S   V  +++  +L S     L+L VL ++L   C P+  T+ +L  A + +    +++  ++ +M
Subjt:  PNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKS-QFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDM

Query:  QSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAV
         S G KPD    N +I  +C  G +  AF++++ +   GC PD+ SY  L+RA     + ++  +L+ +M  + K  P   T   ++  L  + ++  A+
Subjt:  QSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAV

Query:  EIIELLERDSHDVGFESYELLVEGCLECREYIL--AGKVIMAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELG
         +++L++         SY+ L+     CRE  L  A + +  M   G +P I     V+  L   G+ + A  +  +  E+G
Subjt:  EIIELLERDSHDVGFESYELLVEGCLECREYIL--AGKVIMAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELG

Q9SZ52 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic3.5e-1326.34Show/hide
Query:  SLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATA
        ++ V +R++  G  PS QT+  L    L +R    SV  +L +M+++G KP+       I  L   G++ EA+++LK M   GC PD+ +Y  LI A   
Subjt:  SLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATA

Query:  VRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKV
         R+ D A E+ ++M    +  P + T I ++     NR++    +    +E+D H     ++ +LV+   +   +  A   +  M D+G +P +     +
Subjt:  VRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKV

Query:  VEGLYGIGELELASAVRRRFVELG
        + GL  +  L+ A  +      LG
Subjt:  VEGLYGIGELELASAVRRRFVELG

Arabidopsis top hitse value%identityAlignment
AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-9255.21Show/hide
Query:  SISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRI
        SIS  + ++ +IK AVE+K Y ++P L  SL+E   N  LF FLS F  + R +V+DEILQS + VRPRS  + V+ SLL Y LQS  P PLS  +LQR 
Subjt:  SISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRI

Query:  LHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAV
        L SGC+P+PQTH LLS AWL++R  ++SVA+I+ +M+ IGY PD+  CNYL+SSLC++ +L EA +V++ M  AGC+PD+ESYG +I +    R+T   V
Subjt:  LHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAV

Query:  ELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKVVEGLYGIG
        +++KEMV K  + PR+  +  V AALRANRE+ +A+E+IE +E   + V FESYE++VEGCLE REYILAGKV+M MTDRGFIPYIKVRQKVVE L  IG
Subjt:  ELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKVVEGLYGIG

Query:  ELELASAVRRRFVELGS
        E +LA  VR+R  EL S
Subjt:  ELELASAVRRRFVELGS

AT1G62680.1 Pentatricopeptide repeat (PPR) superfamily protein8.2e-1029.71Show/hide
Query:  LSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAAT
        L+L +L ++L  G  P   T   L + + + R++     +++  M  IGYKPD    N +I SLC    + +AF   K +   G  P++ +Y  L+    
Subjt:  LSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAAT

Query:  AVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEG-CLECR
           R   A  LL +M +K K+ P   T   ++ A   N +V  A E+ E + R S D    +Y  L+ G CL  R
Subjt:  AVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEG-CLECR

AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.7e-1023.4Show/hide
Query:  PNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKS-QFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDM
        P++F + +      +   +D+  + L  +R +  S   V  +++  +L S     L+L VL ++L   C P+  T+ +L  A + +    +++  ++ +M
Subjt:  PNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKS-QFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDM

Query:  QSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAV
         S G KPD    N +I  +C  G +  AF++++ +   GC PD+ SY  L+RA     + ++  +L+ +M  + K  P   T   ++  L  + ++  A+
Subjt:  QSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAV

Query:  EIIELLERDSHDVGFESYELLVEGCLECREYIL--AGKVIMAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELG
         +++L++         SY+ L+     CRE  L  A + +  M   G +P I     V+  L   G+ + A  +  +  E+G
Subjt:  EIIELLERDSHDVGFESYELLVEGCLECREYIL--AGKVIMAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELG

AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein4.4e-1122.92Show/hide
Query:  TQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLI
        T++VD +          + +  +HG  L   L        ++ +L+R++ S C+P+  T+  L +  +KQR +A     +L  M+  GY  + +I + LI
Subjt:  TQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLI

Query:  SSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFE
        S L   G+  EA  + + M   GC P++  Y  L+       + ++A E+L  M+     +P   T  +++           AV++ + +++        
Subjt:  SSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFE

Query:  SYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKVVEGLYGIGELELA
         Y +L++G         A  V   M   G  P       +++GL GIG ++ A
Subjt:  SYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKVVEGLYGIGELELA

AT4G31850.1 proton gradient regulation 32.5e-1426.34Show/hide
Query:  SLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATA
        ++ V +R++  G  PS QT+  L    L +R    SV  +L +M+++G KP+       I  L   G++ EA+++LK M   GC PD+ +Y  LI A   
Subjt:  SLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATA

Query:  VRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKV
         R+ D A E+ ++M    +  P + T I ++     NR++    +    +E+D H     ++ +LV+   +   +  A   +  M D+G +P +     +
Subjt:  VRRTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKV

Query:  VEGLYGIGELELASAVRRRFVELG
        + GL  +  L+ A  +      LG
Subjt:  VEGLYGIGELELASAVRRRFVELG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTGGAAGAACAAAGACTTCTGCTTTTCTACTCAATTTCCATCACTTTTTGGAGCAATGTTCTTCTATCCACTCAATATCACCATCACAAACGCTTCAAGACAG
CATTAAAGCTGCAGTTGAATCCAAGTCGTATAAGAAACTTCCCGGTCTGTTTCCTTCGTTGCAAGAAGCTTGCCATAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTC
CTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATTTGTTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTT
CAAAGCCCTTCACCCTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCCGGTTGTGTCCCTTCCCCTCAGACCCATTTTCTACTTTCTTCTGCCTGGCTAAA
ACAACGTAGCCAGGCTAAGTCTGTTGCTAATATATTGATGGATATGCAGTCAATTGGTTACAAGCCTGACAGCAACATATGTAATTATCTTATATCCTCCCTTTGTTCCA
TTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTGTTCCTGATTTGGAGAGTTATGGTACCTTAATTCGTGCAGCAACAGCTGTTAGA
CGGACGGATAAGGCAGTAGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGATGCCAAGACAAAGAACGATTATTAACGTTGTGGCTGCGTTACGAGCAAACCGAGA
GGTAAGGAGAGCTGTTGAGATCATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATA
TTTTAGCGGGAAAGGTGATCATGGCGATGACAGACAGAGGGTTTATACCGTATATCAAGGTCAGGCAAAAGGTTGTTGAGGGGCTGTATGGCATTGGGGAACTGGAACTT
GCTTCTGCGGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
CTTTAAAGAGAGGTATATGAAATTCAATTGCTTGTTCTCTTTTAGTCTTAAACAAGAGAAGGTCTCTCCCATTTCTCCCTCGTCGGCTTAACTCCACTTCCCCACAGTTC
AACAACGTGAAGCTCATGCAGTTCCATCGCCGACTGCAGCAGCCGTGTACTTCCGTCCGCCGGCCTGTGCAGTTCTGTCCGCCAGTCTGCGAATATCAGCTAGGCCGTTC
TATTCGCAACTCTTCTTGACATCAAAGTGATTTCCCGTGAACCATCCGCAGAGTGTTTCGATGAACAGTTATTTGCTACAAGATAAGAACCTCCTATTCTTACTAGCATG
AATATTGGAAGAACAAAGACTTCTGCTTTTCTACTCAATTTCCATCACTTTTTGGAGCAATGTTCTTCTATCCACTCAATATCACCATCACAAACGCTTCAAGACAGCAT
TAAAGCTGCAGTTGAATCCAAGTCGTATAAGAAACTTCCCGGTCTGTTTCCTTCGTTGCAAGAAGCTTGCCATAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTC
TTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATTTGTTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAA
AGCCCTTCACCCTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCCGGTTGTGTCCCTTCCCCTCAGACCCATTTTCTACTTTCTTCTGCCTGGCTAAAACA
ACGTAGCCAGGCTAAGTCTGTTGCTAATATATTGATGGATATGCAGTCAATTGGTTACAAGCCTGACAGCAACATATGTAATTATCTTATATCCTCCCTTTGTTCCATTG
GTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTGTTCCTGATTTGGAGAGTTATGGTACCTTAATTCGTGCAGCAACAGCTGTTAGACGG
ACGGATAAGGCAGTAGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGATGCCAAGACAAAGAACGATTATTAACGTTGTGGCTGCGTTACGAGCAAACCGAGAGGT
AAGGAGAGCTGTTGAGATCATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTT
TAGCGGGAAAGGTGATCATGGCGATGACAGACAGAGGGTTTATACCGTATATCAAGGTCAGGCAAAAGGTTGTTGAGGGGCTGTATGGCATTGGGGAACTGGAACTTGCT
TCTGCGGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAG
Protein sequenceShow/hide protein sequence
MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTL
QSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVR
RTDKAVELLKEMVVKVKLMPRQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVIMAMTDRGFIPYIKVRQKVVEGLYGIGELEL
ASAVRRRFVELGS