; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002183 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002183
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L18a-like protein
Genome locationchr07:2777861..2782199
RNA-Seq ExpressionIVF0002183
SyntenyIVF0002183
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146004.1 60S ribosomal protein L18a-like protein [Cucumis sativus]2.30e-10292.16Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MS++DKSAAVGVVVHHHHESNS HPHYGTFQGVANYPPV F  PTR PG+ DSDDPSQYQHYAHGYQAVPGYAIVEGRPVREP LPCCGIGIGWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        FFLAAIPWYAGAILI+CGRVDYREKPGYVACSIAAVIAT+AIIFGATREADVW
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

XP_008452440.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]5.65e-112100Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

XP_022936871.1 60S ribosomal protein L18a-like protein [Cucurbita moschata]8.63e-9184.97Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MSQEDKSAAVGVVVHHHHE N  HPHYGTFQGVANYPPV FPQPTRPPG+SD DD SQ +HYAHGYQ V GYA+VEGRPVREP LPCCGIG GWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        F L A  WY GAILILCGRV YREKPGYVACSIAAVIAT+AIIFGAT+ ADVW
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

XP_022976878.1 60S ribosomal protein L18a-like protein [Cucurbita maxima]2.47e-9085.62Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MSQEDKSAAVGVVVHHHHE N  HPHYGTFQGVANYPPV FPQPTRPPG+SD DD SQ Q+YAHGYQ V GYAIVEGRPVREP LPCCGIG GWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        F L A  WY GAILILCGRV YREKPGYVACSIAAVIAT+AIIFGAT+ ADVW
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

XP_038896754.1 60S ribosomal protein L18a-like protein [Benincasa hispida]1.09e-10092.16Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MSQEDKSAAVGVVVHHHHESNS HP YGTFQGVANYPPV FPQPTRPPG+SDSDDPSQYQ YAHGYQAVPGY IVEGRPVRE  LPCCGIGIGWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        FFLAAIPWYAGAILILCGRVDYREKPGYVAC IAAV+AT+AIIFGATREAD W
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

TrEMBL top hitse value%identityAlignment
A0A0A0L1Y0 Uncharacterized protein9.3e-7892.16Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MS++DKSAAVGVVVHHHHESNS HPHYGTFQGVANYPPV F  PTR PG+ DSDDPSQYQHYAHGYQAVPGYAIVEGRPVREP LPCCGIGIGWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        FFLAAIPWYAGAILI+CGRVDYREKPGYVACSIAAVIAT+AIIFGATREADVW
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

A0A1S3BUZ1 60S ribosomal protein L18a-like protein4.6e-85100Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

A0A5D3D9U1 60S ribosomal protein L18a-like protein4.6e-85100Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

A0A6J1F8P0 60S ribosomal protein L18a-like protein6.0e-6984.97Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MSQEDKSAAVGVVVHHHHE N  HPHYGTFQGVANYPPV FPQPTRPPG+SD DD SQ +HYAHGYQ V GYA+VEGRPVREP LPCCGIG GWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        F L A  WY GAILILCGRV YREKPGYVACSIAAVIAT+AIIFGAT+ ADVW
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

A0A6J1INF5 60S ribosomal protein L18a-like protein1.3e-6885.62Show/hide
Query:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG
        MSQEDKSAAVGVVVHHHHE N  HPHYGTFQGVANYPPV FPQPTRPPG+SD DD SQ Q+YAHGYQ V GYAIVEGRPVREP LPCCGIG GWFLFIIG
Subjt:  MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIG

Query:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        F L A  WY GAILILCGRV YREKPGYVACSIAAVIAT+AIIFGAT+ ADVW
Subjt:  FFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein9.1e-3048.2Show/hide
Query:  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAIL
        +YGTFQGVAN+    PP +F QP  P    PG    +        +YA G+   VP Y +VE RP+ E  LPCCG+G+GWFLFI+GF    IPWY GA +
Subjt:  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAIL

Query:  ILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        +L   VD+REK GYVACSIA+V+  +A++ G T + ++W
Subjt:  ILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family3.0e-4454.37Show/hide
Query:  QEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVE-------FPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGY-AIVEGRPVREPPLPCCGIGIGW
        +EDKS           E  + H  YGTFQGV+NYPP +       FPQP+ PPG+ DS  P    +YAHGYQ VP +  + EGRPVR+  LPCCGIG+GW
Subjt:  QEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVE-------FPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGY-AIVEGRPVREPPLPCCGIGIGW

Query:  FLFIIGFFLAAIPWYAGAILILCG-RVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        FLFI+GFFL AIPWY G  +++ G R+DYREKPGY+AC+IAA++AT+A+I G ++ AD W
Subjt:  FLFIIGFFLAAIPWYAGAILILCG-RVDYREKPGYVACSIAAVIATLAIIFGATREADVW

AT1G29970.1 60S ribosomal protein L18A-16.4e-3148.2Show/hide
Query:  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAIL
        +YGTFQGVAN+    PP +F QP  P    PG    +        +YA G+   VP Y +VE RP+ E  LPCCG+G+GWFLFI+GF    IPWY GA +
Subjt:  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAIL

Query:  ILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        +L   VD+REK GYVACSIA+V+  +A++ G T + ++W
Subjt:  ILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

AT1G29970.2 60S ribosomal protein L18A-11.3e-2651.67Show/hide
Query:  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAIL
        +YGTFQGVAN+    PP +F QP  P    PG    +        +YA G+   VP Y +VE RP+ E  LPCCG+G+GWFLFI+GF    IPWY GA +
Subjt:  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAIL

Query:  ILCGRVDYREKPGYVACSIA
        +L   VD+REK GYVACSIA
Subjt:  ILCGRVDYREKPGYVACSIA

AT1G29970.3 60S ribosomal protein L18A-19.0e-2537.02Show/hide
Query:  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAIVEGRPVREPPLPCCGIGIGWFL------------------
        +YGTFQGVAN+    PP +F QP  P    PG    +        +YA G+   VP Y +VE RP+ E  LPCCG+G+GWFL                  
Subjt:  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAIVEGRPVREPPLPCCGIGIGWFL------------------

Query:  ------------------------FIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
                                FI+GF    IPWY GA ++L   VD+REK GYVACSIA+V+  +A++ G T + ++W
Subjt:  ------------------------FIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW

AT1G53560.1 Ribosomal protein L18ae family6.0e-3753.24Show/hide
Query:  YGTFQGVANYPP------------VEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAIL
        YGTFQGV  YPP            +  PQP+ PPG S   D S +Q Y   +Q V GY + +GRP R+  LPCCG+G+GWFLFIIGF L AIPWY G  +
Subjt:  YGTFQGVANYPP------------VEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAIL

Query:  ILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
        ++C R+D REKPGYVAC+IAAV+AT+ I+FG      VW
Subjt:  ILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAAGAAGACAAATCCGCCGCTGTGGGTGTCGTCGTCCACCACCATCACGAATCCAATTCCGCCCATCCTCACTACGGAACCTTCCAAGGCGTCGCTAATTATCC
TCCCGTCGAATTCCCTCAGCCTACTCGCCCGCCTGGTCTCTCTGACTCCGACGATCCTTCTCAATATCAGCACTATGCTCACGGCTATCAAGCTGTACCCGGATATGCTA
TTGTTGAAGGAAGACCAGTGAGAGAGCCGCCCCTTCCTTGCTGTGGCATTGGCATTGGGTGGTTCCTGTTTATTATTGGTTTCTTCCTTGCTGCTATCCCATGGTATGCT
GGAGCAATTCTTATACTATGTGGCAGGGTTGACTACCGTGAGAAACCAGGATATGTTGCCTGCTCAATTGCTGCTGTTATTGCCACACTTGCAATTATATTCGGTGCAAC
AAGGGAAGCTGATGTCTGGTAA
mRNA sequenceShow/hide mRNA sequence
TTTAAAATAATGTATAATTGTTCAAAAAATTTATTAAAAAAAAAATTCGATTTTTTAAATATAACAAAATATCACCCACTTTCTACTATTGAGGTTTTAAAAAAATTAAT
TTTAATAGGATCCCTCATGTTCTCAATTTGATCCATTTCGGCCGACGGTTTCGTTTCTAGAGAGAGAGAATGAGCCAAGAAGACAAATCCGCCGCTGTGGGTGTCGTCGT
CCACCACCATCACGAATCCAATTCCGCCCATCCTCACTACGGAACCTTCCAAGGCGTCGCTAATTATCCTCCCGTCGAATTCCCTCAGCCTACTCGCCCGCCTGGTCTCT
CTGACTCCGACGATCCTTCTCAATATCAGCACTATGCTCACGGCTATCAAGCTGTACCCGGATATGCTATTGTTGAAGGAAGACCAGTGAGAGAGCCGCCCCTTCCTTGC
TGTGGCATTGGCATTGGGTGGTTCCTGTTTATTATTGGTTTCTTCCTTGCTGCTATCCCATGGTATGCTGGAGCAATTCTTATACTATGTGGCAGGGTTGACTACCGTGA
GAAACCAGGATATGTTGCCTGCTCAATTGCTGCTGTTATTGCCACACTTGCAATTATATTCGGTGCAACAAGGGAAGCTGATGTCTGGTAACCAATCCTAAACTTAAAGT
ATTGTACAGTTTGCAAATATGTATGAACTGACAGAGCCCATGGGCAAGCTTAGTTCCATTGAAACCTGAATCTGTGAGAGCCTATCACTACAAGAAATTACACTTTTCCC
AATGGATAAACTCATTGGGAAAACTCCGAAAAGCTTCTGGAAAATTTCTCCCGACGCCACATTGGCCATTGTCATGATCGTCAGGAAAGATTTCCTCGGGAGAAGCTTAA
TTTCTTGTGGTGTATAGATATTGGTTAGTGGTTGTTTCCATGTTGTGCCCCTAAGAAGCTGTGCCTGCAAAATCATGTTATTTGTTTTAAATCTACGATATGTGTTATGA
TGACTATTCATCTTAAACTCATGTGTAGAAACCTACTTATCCTTTGGTAAATATATTTCTTTCTGCTTGTTTGGAATAAGCATTTGAACATCAAAACAGAAAACTGTTTT
ACCAATCAAGATTGCATGTTCCTCGAGGAGGTTGCTCTGCCTGATGGATGGTCTTCAAAGGTAAAGACATTTTCACACACCTCAGTCTAGGTAAGGTAGG
Protein sequenceShow/hide protein sequence
MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYA
GAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW