; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002206 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002206
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr07:22765099..22765698
RNA-Seq ExpressionIVF0002206
SyntenyIVF0002206
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044544.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]2.19e-12391.24Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQEL ILND+LFKFPVIAMDTEFPGFLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNKK------QRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM
        IQYLKNKK      QRKDGIPSAEFR AFLPI  SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQRHLGTVNDLKHMIRNCE+LM
Subjt:  IQYLKNKK------QRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM

TYK17042.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]3.72e-144100Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNKKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM
        IQYLKNKKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM
Subjt:  IQYLKNKKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]2.09e-12189.69Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QEL ILND+LFKFPVIAMDTEFPGFLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNKK------QRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM
        IQYLKNKK      QRKDGIPSAEFR AFLPI  SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQRHLGTVNDLKHMIRNCE+LM
Subjt:  IQYLKNKK------QRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM

XP_008454487.2 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]3.21e-120100Show/hide
Query:  MDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPILFSN
        MDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPILFSN
Subjt:  MDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPILFSN

Query:  QITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM
        QITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM
Subjt:  QITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM

XP_008466654.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]7.68e-11586.6Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQEL ILND+LFK P+I MDTEF GFLRST RGAPEEHLYQDLKFNLNHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM
        IQYLKN      KK RK  IPSAEFR AFLPI  SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFA IAQR LGTVNDLKHMI NCEHLM
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM

TrEMBL top hitse value%identityAlignment
A0A1S3BY95 Poly(A)-specific ribonuclease7.0e-9489.69Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QEL ILND+LFKFPVIAMDTEFPGFLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM
        IQYLKN      KKQRKDGIPSAEFR AFLPI  SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQRHLGTVNDLKHMIRNCE+LM
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM

A0A1S3BYU5 putative CCR4-associated factor 1 homolog 85.0e-92100Show/hide
Query:  MDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPILFSN
        MDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPILFSN
Subjt:  MDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQRKDGIPSAEFRHAFLPILFSN

Query:  QITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM
        QITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM
Subjt:  QITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM

A0A5A7TN62 Poly(A)-specific ribonuclease2.2e-9591.24Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQEL ILND+LFKFPVIAMDTEFPGFLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM
        IQYLKN      KKQRKDGIPSAEFR AFLPI  SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQRHLGTVNDLKHMIRNCE+LM
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM

A0A5D3CZR2 Poly(A)-specific ribonuclease1.8e-110100Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNKKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM
        IQYLKNKKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM
Subjt:  IQYLKNKKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM

A0A5D3D333 Poly(A)-specific ribonuclease7.0e-9489.69Show/hide
Query:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QEL ILND+LFKFPVIAMDTEFPGFLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKN------KKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM
        IQYLKN      KKQRKDGIPSAEFR AFLPI  SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQRHLGTVNDLKHMIRNCE+LM
Subjt:  IQYLKN------KKQRKDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLM

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 96.1e-2634.85Show/hide
Query:  RQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL-RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD
        R+VW  NL  E  ++++ +  +P I+MDTEFPG + +S  R    + LY  LK N++ L ++Q+GLTL D N          H G  W F F DFD   D
Subjt:  RQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL-RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD

Query:  FSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLG-TVNDLKHMIRNCE
          +P SI+ L+      ++  +DG+ S  F    +   L  N+   W+TFH  +D  YL+K++  R +P ++ EF  + +   G  V D+KHM++ CE
Subjt:  FSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLG-TVNDLKHMIRNCE

Q9LXM4 Putative CCR4-associated factor 1 homolog 83.3e-2437.08Show/hide
Query:  LTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN-----KKQR
        ++++ D L  +  IA+DTEFP  LR T++ A +E  Y D+ F+++  K++QLGLTL D N  +G +W   FSDF    D  +  SI++L+      +K R
Subjt:  LTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN-----KKQR

Query:  KDGIP-SAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL
        ++GI     F   F  +  + +   W+TFHG +D+AYLLK      +P +   F+    R LG+V DLK M   CE L
Subjt:  KDGIP-SAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL

Q9S9P2 Probable CCR4-associated factor 1 homolog 22.2e-2330.99Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSD
        +R+VW HNL QE+ ++   +  FP +AMDTEFPG +  T    P         E+ Y  LK N+N LK++QLGLTL DE  ++          W F F +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSD

Query:  FDEQTDFSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIR
        F+  +D  +  SI+ L+      +K  + G+ +  F    +   +  N    W+TFH  +D  YLLKL+  + +P+ + +F    ++    V D+K+++ 
Subjt:  FDEQTDFSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIR

Query:  NCEHLMMDLRDLS
         C +L   L  ++
Subjt:  NCEHLMMDLRDLS

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.6e-2634.62Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  NL +E+ ++ D +  FP +AMDTEFPG +     T +   + H Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL
        D  +  SI+ LK       K   DGI S  F    +   +  N+   W+TFH  +D  YLLKL+  + +PDS  +F  +   +  TV D+KH+++ C  L
Subjt:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL

Query:  MMDLRDLS
           L  L+
Subjt:  MMDLRDLS

Q9SKZ2 Probable CCR4-associated factor 1 homolog 75.7e-2432.54Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ
        +R+VW  NL  E+ ++ + +  FP +AMDTEFPG +     T +   E H Y+ LK N+N LK++QLGLT  DE  ++           W F F +FD +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ

Query:  TDFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEH
        +D  +  SI+ L+       K  + GI S  F    +   +  N+   W+TFH  +D  YLLKL+  + +P++   F  +   +   V D+KH+++ C  
Subjt:  TDFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEH

Query:  LMMDLRDLS
        L   L  L+
Subjt:  LMMDLRDLS

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-2734.62Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  NL +E+ ++ D +  FP +AMDTEFPG +     T +   + H Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL
        D  +  SI+ LK       K   DGI S  F    +   +  N+   W+TFH  +D  YLLKL+  + +PDS  +F  +   +  TV D+KH+++ C  L
Subjt:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL

Query:  MMDLRDLS
           L  L+
Subjt:  MMDLRDLS

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-2734.62Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  NL +E+ ++ D +  FP +AMDTEFPG +     T +   + H Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL
        D  +  SI+ LK       K   DGI S  F    +   +  N+   W+TFH  +D  YLLKL+  + +PDS  +F  +   +  TV D+KH+++ C  L
Subjt:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL

Query:  MMDLRDLS
           L  L+
Subjt:  MMDLRDLS

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-2734.62Show/hide
Query:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  NL +E+ ++ D +  FP +AMDTEFPG +     T +   + H Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL---RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL
        D  +  SI+ LK       K   DGI S  F    +   +  N+   W+TFH  +D  YLLKL+  + +PDS  +F  +   +  TV D+KH+++ C  L
Subjt:  DFSSPTSIQYLKNK-----KQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL

Query:  MMDLRDLS
           L  L+
Subjt:  MMDLRDLS

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-2537.08Show/hide
Query:  LTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN-----KKQR
        ++++ D L  +  IA+DTEFP  LR T++ A +E  Y D+ F+++  K++QLGLTL D N  +G +W   FSDF    D  +  SI++L+      +K R
Subjt:  LTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN-----KKQR

Query:  KDGIP-SAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL
        ++GI     F   F  +  + +   W+TFHG +D+AYLLK      +P +   F+    R LG+V DLK M   CE L
Subjt:  KDGIP-SAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHL

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.3e-2734.85Show/hide
Query:  RQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL-RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD
        R+VW  NL  E  ++++ +  +P I+MDTEFPG + +S  R    + LY  LK N++ L ++Q+GLTL D N          H G  W F F DFD   D
Subjt:  RQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFL-RSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD

Query:  FSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLG-TVNDLKHMIRNCE
          +P SI+ L+      ++  +DG+ S  F    +   L  N+   W+TFH  +D  YL+K++  R +P ++ EF  + +   G  V D+KHM++ CE
Subjt:  FSSPTSIQYLKN-----KKQRKDGIPSAEFRHAFLPI-LFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLG-TVNDLKHMIRNCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCGTTCGACAAGTTTGGTATCATAATCTTACCCAAGAATTGACCATTCTCAACGATCGACTTTTCAAGTTTCCAGTGATCGCGATGGACACTGAGTTCCCCGG
CTTTCTCCGATCAACTTCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTAAAAATTCTTCAACTGGGTCTCACTTTGATGGATG
AGAACGAGCATGTTGGGTTGTCTTGGGTGTTTACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACGTCAATCCAATATTTGAAGAACAAGAAACAGAGG
AAAGACGGAATTCCATCAGCTGAATTCCGACATGCATTTTTGCCGATCTTGTTTAGCAATCAAATAACTAAATGGATCACATTTCATGGCATTCACGATGTTGCTTATTT
GTTGAAGCTAATGATGATTAGAACCATGCCGGATTCCATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGTCAACGACCTAAAACACATGATTCGCAATT
GTGAACACTTAATGATGGACTTAAGAGACTTGTCGAGTTACTCAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCGTTCGACAAGTTTGGTATCATAATCTTACCCAAGAATTGACCATTCTCAACGATCGACTTTTCAAGTTTCCAGTGATCGCGATGGACACTGAGTTCCCCGG
CTTTCTCCGATCAACTTCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTAAAAATTCTTCAACTGGGTCTCACTTTGATGGATG
AGAACGAGCATGTTGGGTTGTCTTGGGTGTTTACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACGTCAATCCAATATTTGAAGAACAAGAAACAGAGG
AAAGACGGAATTCCATCAGCTGAATTCCGACATGCATTTTTGCCGATCTTGTTTAGCAATCAAATAACTAAATGGATCACATTTCATGGCATTCACGATGTTGCTTATTT
GTTGAAGCTAATGATGATTAGAACCATGCCGGATTCCATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGTCAACGACCTAAAACACATGATTCGCAATT
GTGAACACTTAATGATGGACTTAAGAGACTTGTCGAGTTACTCAATGTGA
Protein sequenceShow/hide protein sequence
MSFVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKQR
KDGIPSAEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVNDLKHMIRNCEHLMMDLRDLSSYSM