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IVF0002244 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002244
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:23035792..23036040
RNA-Seq ExpressionIVF0002244
SyntenyIVF0002244
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]8.39e-48100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
KAA0046928.1 retrotransposon protein [Cucumis melo var. makuwa]3.98e-48100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
KAA0048362.1 retrotransposon protein [Cucumis melo var. makuwa]7.56e-48100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
KAA0054687.1 retrotransposon protein [Cucumis melo var. makuwa]8.97e-4998.78Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVR LEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
KAA0063125.1 retrotransposon protein [Cucumis melo var. makuwa]4.34e-50100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
TrEMBL top hitse value%identityAlignment
A0A5A7U6Z3 Retrotransposon protein5.6e-37100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
A0A5A7UME4 Retrotransposon protein5.6e-37100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
A0A5A7VB43 Retrotransposon protein5.6e-37100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
A0A5D3CBF7 Retrotransposon protein5.6e-37100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
A0A5D3DPR5 Retrotransposon protein5.6e-37100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGA
CATAGTTCGTACTGCCATTGAGTATGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGATGCTACCCAAACACGTCAAGAGATTGTTCGAC
ATTTGGAGGCCATCCCTGAGCTCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGA
CATAGTTCGTACTGCCATTGAGTATGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGATGCTACCCAAACACGTCAAGAGATTGTTCGAC
ATTTGGAGGCCATCCCTGAGCTCACATGA
Protein sequenceShow/hide protein sequence
MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELT